From 5b270d2e5608a03f8a609bbb04b3686b2f544f56 Mon Sep 17 00:00:00 2001
From: "kate.friedman" <kate.friedman@noaa.gov>
Date: Thu, 12 May 2022 10:59:31 -0500
Subject: [PATCH] Add --init to GSI submodule command

Needed to obtain libsrc submodule during checkout and allows
the GSI to build correctly since this GSI hash still needs the
libsrc submodule during build.

Refs: #780
---
 sorc/checkout.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/checkout.sh b/sorc/checkout.sh
index 2dfd6d1b21a..1c6bfa2ffdc 100755
--- a/sorc/checkout.sh
+++ b/sorc/checkout.sh
@@ -44,7 +44,7 @@ if [[ ! -d gsi.fd ]] ; then
     git clone --recursive https://github.com/NOAA-EMC/GSI.git gsi.fd >> ${logdir}/checkout-gsi.log 2>&1
     cd gsi.fd
     git checkout a62dec6
-    git submodule update
+    git submodule update --init
     cd ${topdir}
 else
     echo 'Skip.  Directory gsi.fd already exists.'