From 8bdcebc74ca29d7da2789feecbfc4fba131f3795 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Thu, 14 Aug 2025 01:13:47 +0000
Subject: [PATCH 1/9] add ush and parm of SPOC: issue #3943

---
 sorc/link_workflow.sh | 11 +++++++++++
 1 file changed, 11 insertions(+)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index bc69ddabeb3..14910344491 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -236,6 +236,17 @@ if [[ -d "${HOMEgfs}/sorc/gdas.cd" ]]; then
   done
 fi
 
+#------------------------------
+#--add SPOC parm and ush directory
+#------------------------------
+for target in ush parm; do
+  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${target}"
+  if [[ -d "$src" ]]; then
+    cd "${HOMEgfs}/${target}" || exit 1
+    ${LINK_OR_COPY} "$src" "spoc"
+  fi
+done
+
 #------------------------------
 #--add GDASApp files
 #------------------------------

From bfeccb8cc2b7110d132361c31587441838ec63cd Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Thu, 14 Aug 2025 14:10:03 +0000
Subject: [PATCH 2/9] putting brace around variable

---
 sorc/link_workflow.sh | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index 14910344491..ac42796f5ba 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -241,9 +241,9 @@ fi
 #------------------------------
 for target in ush parm; do
   src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${target}"
-  if [[ -d "$src" ]]; then
+  if [[ -d "${src}" ]]; then
     cd "${HOMEgfs}/${target}" || exit 1
-    ${LINK_OR_COPY} "$src" "spoc"
+    ${LINK_OR_COPY} "${src}" "spoc"
   fi
 done
 

From e2124397203a7c36d435eb052e0431e20a3bf0f0 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Fri, 15 Aug 2025 01:45:54 +0000
Subject: [PATCH 3/9] update gdas.cd hash

---
 sorc/gdas.cd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/gdas.cd b/sorc/gdas.cd
index 41a5edc4a13..261cd470d24 160000
--- a/sorc/gdas.cd
+++ b/sorc/gdas.cd
@@ -1 +1 @@
-Subproject commit 41a5edc4a135f5b25e469e0650a4e857fa00b219
+Subproject commit 261cd470d2478ab1ea68a81201f6a3a273aaed14

From 340525aecb629448435a0909692c35e792faca14 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Fri, 19 Sep 2025 18:48:38 +0000
Subject: [PATCH 4/9] config to parm and scripts to ush

---
 sorc/link_workflow.sh | 10 +++++++---
 1 file changed, 7 insertions(+), 3 deletions(-)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index ac42796f5ba..50a5912950c 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -239,10 +239,14 @@ fi
 #------------------------------
 #--add SPOC parm and ush directory
 #------------------------------
-for target in ush parm; do
-  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${target}"
+sources=("config" "scripts")
+targets=("parm" "ush")
+for i in "${!sources[@]}"; do
+  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${sources[$i]}"
+  dst="${HOMEgfs}/${targets[$i]}"
+
   if [[ -d "${src}" ]]; then
-    cd "${HOMEgfs}/${target}" || exit 1
+    cd "$dst" || exit 1
     ${LINK_OR_COPY} "${src}" "spoc"
   fi
 done

From 97ac1982fc46a79d31ad9eecbf40536b858ebb13 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Mon, 22 Sep 2025 13:15:45 +0000
Subject: [PATCH 5/9] update hash of gdas.cd

---
 sorc/gdas.cd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/gdas.cd b/sorc/gdas.cd
index 261cd470d24..a1e92656bbb 160000
--- a/sorc/gdas.cd
+++ b/sorc/gdas.cd
@@ -1 +1 @@
-Subproject commit 261cd470d2478ab1ea68a81201f6a3a273aaed14
+Subproject commit a1e92656bbb279faa394c670e04902305791a0ab

From b2700f198bff9f1d21ff098146c47ef841d0e8fc Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Wed, 24 Sep 2025 16:50:17 +0000
Subject: [PATCH 6/9] updated sorc/gdas.cd to hash 3809a5d

---
 sorc/gdas.cd | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/gdas.cd b/sorc/gdas.cd
index a1e92656bbb..3809a5d93af 160000
--- a/sorc/gdas.cd
+++ b/sorc/gdas.cd
@@ -1 +1 @@
-Subproject commit a1e92656bbb279faa394c670e04902305791a0ab
+Subproject commit 3809a5d93afeb9b2009d6bedceaa6c18c51d2d06

From 192642b0b8b35ed5fa9943bd7feb37d82bd1a9e2 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Thu, 25 Sep 2025 16:09:03 +0000
Subject: [PATCH 7/9] add braces around variables

---
 sorc/link_workflow.sh | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index 8c7edb5f29a..e9bd47ac81a 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -251,11 +251,11 @@ fi
 sources=("config" "scripts")
 targets=("parm" "ush")
 for i in "${!sources[@]}"; do
-  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${sources[$i]}"
-  dst="${HOMEgfs}/${targets[$i]}"
+  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${sources[${i}]}"
+  dst="${HOMEgfs}/${targets[${i}]}"
 
   if [[ -d "${src}" ]]; then
-    cd "$dst" || exit 1
+    cd "${dst}" || exit 1
     ${LINK_OR_COPY} "${src}" "spoc"
   fi
 done

From 35bb162c37587afb9b7bbd9a779ac0494a5c8e03 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Thu, 25 Sep 2025 17:48:45 +0000
Subject: [PATCH 8/9] correct the source in the link

---
 sorc/link_workflow.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index e9bd47ac81a..c9beb74b71c 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -251,7 +251,7 @@ fi
 sources=("config" "scripts")
 targets=("parm" "ush")
 for i in "${!sources[@]}"; do
-  src="${HOMEgfs}/sorc/gdas.cd/spoc/dump/${sources[${i}]}"
+  src="${HOMEgfs}/sorc/gdas.cd/sorc/spoc/dump/${sources[${i}]}"
   dst="${HOMEgfs}/${targets[${i}]}"
 
   if [[ -d "${src}" ]]; then

From 97f9a1972d865c6d9f4306f0601dd112a0bd7705 Mon Sep 17 00:00:00 2001
From: Xin Jin <Xin.C.Jin@noaa.gov>
Date: Thu, 25 Sep 2025 18:55:59 +0000
Subject: [PATCH 9/9] change parm to parm/gdas

---
 sorc/link_workflow.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sorc/link_workflow.sh b/sorc/link_workflow.sh
index c9beb74b71c..0d6eed92442 100755
--- a/sorc/link_workflow.sh
+++ b/sorc/link_workflow.sh
@@ -249,7 +249,7 @@ fi
 #--add SPOC parm and ush directory
 #------------------------------
 sources=("config" "scripts")
-targets=("parm" "ush")
+targets=("parm/gdas" "ush")
 for i in "${!sources[@]}"; do
   src="${HOMEgfs}/sorc/gdas.cd/sorc/spoc/dump/${sources[${i}]}"
   dst="${HOMEgfs}/${targets[${i}]}"