diff --git a/Externals.cfg b/Externals.cfg index e8851e2a6b9..3bc53ffe64a 100644 --- a/Externals.cfg +++ b/Externals.cfg @@ -1,7 +1,7 @@ # External sub-modules of global-workflow [UFS] -tag = Prototype-P8 +tag = 3c3548d local_path = sorc/ufs_model.fd repo_url = https://github.com/ufs-community/ufs-weather-model.git protocol = git diff --git a/modulefiles/module_base.hera.lua b/modulefiles/module_base.hera.lua index 14c523c5180..5126fdfd464 100644 --- a/modulefiles/module_base.hera.lua +++ b/modulefiles/module_base.hera.lua @@ -8,6 +8,8 @@ load(pathJoin("hpc", "1.1.0")) load(pathJoin("hpc-intel", "18.0.5.274")) load(pathJoin("hpc-impi", "2018.0.4")) +load(pathJoin("cmake", "3.20.1")) + load(pathJoin("hpss", "hpss")) load(pathJoin("nco", "4.9.1")) load(pathJoin("gempak", "7.4.2")) @@ -25,8 +27,8 @@ load(pathJoin("png", "1.6.35")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("pio", "2.5.2")) -load(pathJoin("esmf", "8.2.1b04")) +load(pathJoin("pio", "2.5.7")) +load(pathJoin("esmf", "8.3.0b09")) load(pathJoin("fms", "2021.03")) load(pathJoin("bacio", "2.4.1")) diff --git a/modulefiles/module_base.orion.lua b/modulefiles/module_base.orion.lua index bdb85d7430e..98fc476d0c4 100644 --- a/modulefiles/module_base.orion.lua +++ b/modulefiles/module_base.orion.lua @@ -8,6 +8,8 @@ load(pathJoin("hpc", "1.1.0")) load(pathJoin("hpc-intel", "2018.4")) load(pathJoin("hpc-impi", "2018.4")) +load(pathJoin("cmake", "3.22.1")) + load(pathJoin("nco", "4.8.1")) load(pathJoin("gempak", "7.5.1")) load(pathJoin("ncl", "6.6.2")) @@ -24,8 +26,8 @@ load(pathJoin("png", "1.6.35")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("pio", "2.5.2")) -load(pathJoin("esmf", "8.2.1b04")) +load(pathJoin("pio", "2.5.7")) +load(pathJoin("esmf", "8.3.0b09")) load(pathJoin("fms", "2021.03")) load(pathJoin("bacio", "2.4.1")) diff --git a/modulefiles/modulefile.ww3.hera.lua b/modulefiles/modulefile.ww3.hera.lua index 287f02d0642..9b1ab7492ed 100644 --- a/modulefiles/modulefile.ww3.hera.lua +++ b/modulefiles/modulefile.ww3.hera.lua @@ -20,4 +20,4 @@ load(pathJoin("g2", "3.4.5")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("w3nco", "2.4.1")) +load(pathJoin("w3emc", "2.9.2")) diff --git a/modulefiles/modulefile.ww3.orion.lua b/modulefiles/modulefile.ww3.orion.lua index 2a1409f9f0a..de1da6b4f95 100644 --- a/modulefiles/modulefile.ww3.orion.lua +++ b/modulefiles/modulefile.ww3.orion.lua @@ -22,4 +22,4 @@ load(pathJoin("g2", "3.4.5")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("w3nco", "2.4.1")) +load(pathJoin("w3emc", "2.9.2")) diff --git a/modulefiles/modulefile.ww3.s4.lua b/modulefiles/modulefile.ww3.s4.lua index 06aaf6c3fb0..0a8dcb25ff5 100644 --- a/modulefiles/modulefile.ww3.s4.lua +++ b/modulefiles/modulefile.ww3.s4.lua @@ -18,4 +18,4 @@ load(pathJoin("g2", "3.4.1")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("w3nco", "2.4.1")) +load(pathJoin("w3emc", "2.9.2")) diff --git a/modulefiles/modulefile.ww3.wcoss2.lua b/modulefiles/modulefile.ww3.wcoss2.lua index 8923ee6c7ab..3536428d31f 100644 --- a/modulefiles/modulefile.ww3.wcoss2.lua +++ b/modulefiles/modulefile.ww3.wcoss2.lua @@ -19,4 +19,4 @@ load(pathJoin("g2", "3.4.5")) load(pathJoin("hdf5", "1.10.6")) load(pathJoin("netcdf", "4.7.4")) -load(pathJoin("w3nco", "2.4.1")) +load(pathJoin("w3emc", "2.9.2")) diff --git a/parm/config/config.resources b/parm/config/config.resources index 21ec6d2b5bd..99f686ba700 100755 --- a/parm/config/config.resources +++ b/parm/config/config.resources @@ -311,6 +311,11 @@ elif [ ${step} = "fcst" ]; then # Aerosol model only uses the atm model PETS export CHMPETS=${ATMPETS} # Aerosol model runs on same PETs as ATM, so don't add to $NTASKS_TOT + + if [[ ${machine} == "HERA" ]]; then + # Need more memory on Hera for aerosols, so increase threads to spread it out + nth_fv3_gfs=${nth_fv3_gfs:-4} + fi fi # If using in-line post, add the write tasks to the ATMPETS diff --git a/sorc/build_ufs.sh b/sorc/build_ufs.sh index 4225debff9b..df1378ca662 100755 --- a/sorc/build_ufs.sh +++ b/sorc/build_ufs.sh @@ -33,6 +33,6 @@ CLEAN_AFTER=NO ./tests/compile.sh $MACHINE_ID "$MAKE_OPT" $COMPILE_NR $CLEAN_BEFORE $CLEAN_AFTER mv ./tests/fv3_${COMPILE_NR}.exe ./tests/ufs_model.x -mv ./tests/modules.fv3_${COMPILE_NR} ./tests/modules.ufs_model +mv ./tests/modules.fv3_${COMPILE_NR}.lua ./tests/modules.ufs_model.lua exit 0 diff --git a/sorc/checkout.sh b/sorc/checkout.sh index 441cd781244..d6326e5da9a 100755 --- a/sorc/checkout.sh +++ b/sorc/checkout.sh @@ -107,7 +107,6 @@ checkout_gsi="NO" checkout_gdas="NO" checkout_gtg="NO" checkout_wafs="NO" -ufs_model_hash="Prototype-P8" # Parse command line arguments while getopts ":chgum:o" option; do @@ -153,9 +152,9 @@ mkdir -p "${logdir}" # The checkout version should always be a speciifc commit (hash or tag), not a branch errs=0 checkout "gfs_utils.fd" "https://github.com/NOAA-EMC/gfs-utils" "7bf599f" ; errs=$((errs + $?)) -checkout "ufs_model.fd" "https://github.com/ufs-community/ufs-weather-model" "${ufs_model_hash}"; errs=$((errs + $?)) -checkout "ufs_utils.fd" "https://github.com/ufs-community/UFS_UTILS.git" "8b990c0" ; errs=$((errs + $?)) -checkout "verif-global.fd" "https://github.com/NOAA-EMC/EMC_verif-global.git" "c267780" ; errs=$((errs + $?)) +checkout "ufs_model.fd" "https://github.com/ufs-community/ufs-weather-model" "${ufs_model_hash:-3c3548d}" ; errs=$((errs + $?)) +checkout "ufs_utils.fd" "https://github.com/ufs-community/UFS_UTILS.git" "8b990c0" ; errs=$((errs + $?)) +checkout "verif-global.fd" "https://github.com/NOAA-EMC/EMC_verif-global.git" "c267780" ; errs=$((errs + $?)) if [[ ${checkout_gsi} == "YES" ]]; then checkout "gsi_enkf.fd" "https://github.com/NOAA-EMC/GSI.git" "67f5ab4"; errs=$((errs + $?)) diff --git a/ush/forecast_postdet.sh b/ush/forecast_postdet.sh index 7a2ba0e7adb..e74fcac105e 100755 --- a/ush/forecast_postdet.sh +++ b/ush/forecast_postdet.sh @@ -1014,6 +1014,13 @@ GOCART_postdet() { HH=$(echo $VDATE | cut -c9-10) SS=$((10#$HH*3600)) + # + # Temporarily delete existing files due to noclobber in GOCART + # + if [[ -e "${COMOUTaero}/gocart.inst_aod.${YYYY}${MM}${DD}_${HH}00z.nc4" ]]; then + rm "${COMOUTaero}/gocart.inst_aod.${YYYY}${MM}${DD}_${HH}00z.nc4" + fi + $NLN $COMOUTaero/gocart.inst_aod.${YYYY}${MM}${DD}_${HH}00z.nc4 $DATA/gocart.inst_aod.${YYYY}${MM}${DD}_${HH}00z.nc4 done } diff --git a/ush/parsing_namelists_CICE.sh b/ush/parsing_namelists_CICE.sh index f7e00fd0700..64a711bffc3 100755 --- a/ush/parsing_namelists_CICE.sh +++ b/ush/parsing_namelists_CICE.sh @@ -80,8 +80,6 @@ cat > ice_in <