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Invalid name syntax error #240

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dsenalik opened this issue Oct 25, 2022 · 0 comments
Open

Invalid name syntax error #240

dsenalik opened this issue Oct 25, 2022 · 0 comments
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discussion Drupal Problem Error or problem is in Drupal code

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@dsenalik
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Loading a bioproject with this module, you may encounter the error shown below. This is a drupal 7 bug as described in this issue
https://www.drupal.org/project/drupal/issues/3284424
and can be resolved by using the patch described in that thread, specifically:
https://www.drupal.org/files/issues/2022-06-20/3284424-7.patch

This issue is here to let people know about this, and resolution will be when drupal 7 patches this bug.

Running 'NCBI EUtils Accession loader' importer
NOTE: Loading of file is performed using a database transaction. 
If it fails or is terminated prematurely then all insertions and 
updates are rolled back and will not be found in the database

INFO (TRIPAL_EUTILS): Inserting record into Chado: bioproject: 750852
Inserting record into Chado: bioproject: 750852
ERROR (TRIPAL_EUTILS): SQLSTATE[42602]: Invalid name: 7 ERROR:  invalid name syntax
LINE 6: AND pg_attribute.attrelid = '.chado.project'::regclass
                                    ^
[site http://default] [TRIPAL ERROR] [TRIPAL_EUTILS] SQLSTATE[42602]: Invalid name: 7 ERROR:  invalid name syntaxLINE 6: AND pg_attribute.attrelid = '.chado.project'::regclass                                    ^
SQLSTATE[42602]: Invalid name: 7 ERROR:  invalid name syntax
LINE 6: AND pg_attribute.attrelid = '.chado.project'::regclass
                                    ^
[site http://default] [TRIPAL ERROR] [TRIPAL_JOB] SQLSTATE[42602]: Invalid name: 7 ERROR:  invalid name syntaxLINE 6: AND pg_attribute.attrelid = '.chado.project'::regclass                                    ^

Done.
Committing Transaction...
@dsenalik dsenalik added the Drupal Problem Error or problem is in Drupal code label Nov 1, 2022
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Labels
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