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PhaMer.yaml
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name: base
channels:
- pytorch
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _openmp_mutex=4.5=1_gnu
- appdirs=1.4.4=pyhd3eb1b0_0
- biopython=1.78=py38h7f8727e_0
- blas=1.0=mkl
- blast=2.5.0=hc0b0e79_3
- boost=1.73.0=py38h06a4308_11
- bottleneck=1.3.2=py38heb32a55_1
- brotlipy=0.7.0=py38h27cfd23_1003
- bzip2=1.0.8=h7b6447c_0
- ca-certificates=2021.10.26=h06a4308_2
- certifi=2021.10.8=py38h06a4308_2
- cffi=1.14.6=py38h400218f_0
- chardet=4.0.0=py38h06a4308_1003
- conda=4.11.0=py38h06a4308_0
- conda-package-handling=1.7.3=py38h27cfd23_1
- cryptography=3.4.7=py38hd23ed53_0
- cudatoolkit=11.1.1=h6406543_8
- dashing=0.4.0=h735f0e5_3
- diamond=0.9.14=h2e03b76_4
- ffmpeg=4.3=hf484d3e_0
- freetype=2.11.0=h70c0345_0
- giflib=5.2.1=h7b6447c_0
- git-lfs=2.13.3=h06a4308_0
- gmp=6.2.1=h2531618_2
- gnutls=3.6.15=he1e5248_0
- icu=58.2=he6710b0_3
- idna=2.10=pyhd3eb1b0_0
- intel-openmp=2021.4.0=h06a4308_3561
- jpeg=9b=h024ee3a_2
- lame=3.100=h7b6447c_0
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.35.1=h7274673_9
- libboost=1.73.0=h3ff78a5_11
- libffi=3.3=he6710b0_2
- libgcc-ng=9.3.0=h5101ec6_17
- libgfortran-ng=7.5.0=ha8ba4b0_17
- libgfortran4=7.5.0=ha8ba4b0_17
- libgomp=9.3.0=h5101ec6_17
- libiconv=1.15=h63c8f33_5
- libidn2=2.3.2=h7f8727e_0
- libpng=1.6.37=hbc83047_0
- libstdcxx-ng=9.3.0=hd4cf53a_17
- libtasn1=4.16.0=h27cfd23_0
- libtiff=4.2.0=h85742a9_0
- libunistring=0.9.10=h27cfd23_0
- libuv=1.40.0=h7b6447c_0
- libwebp=1.2.0=h89dd481_0
- libwebp-base=1.2.0=h27cfd23_0
- lz4-c=1.9.3=h295c915_1
- mcl=14.137=pl5262h779adbc_6
- mkl=2021.4.0=h06a4308_640
- mkl-service=2.4.0=py38h7f8727e_0
- mkl_fft=1.3.1=py38hd3c417c_0
- mkl_random=1.2.2=py38h51133e4_0
- ncbi-genome-download=0.3.1=pyh5e36f6f_0
- ncurses=6.2=he6710b0_1
- nettle=3.7.3=hbbd107a_1
- networkx=2.6.3=pyhd3eb1b0_0
- ninja=1.10.2=h4bd325d_0
- numexpr=2.7.3=py38h22e1b3c_1
- numpy=1.21.2=py38h20f2e39_0
- numpy-base=1.21.2=py38h79a1101_0
- olefile=0.46=pyhd3eb1b0_0
- openh264=2.1.0=hd408876_0
- openssl=1.1.1m=h7f8727e_0
- pandas=1.3.4=py38h8c16a72_0
- perl=5.26.2=h14c3975_0
- pillow=8.4.0=py38h5aabda8_0
- pip=21.1.3=py38h06a4308_0
- pprodigal=1.0.1=pyhdfd78af_0
- prodigal=2.6.3=h779adbc_3
- py-boost=1.73.0=py38ha9443f7_11
- pycosat=0.6.3=py38h7b6447c_1
- pycparser=2.20=py_2
- pyopenssl=20.0.1=pyhd3eb1b0_1
- pysocks=1.7.1=py38h06a4308_0
- python=3.8.10=h12debd9_8
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.8=2_cp38
- pytorch=1.8.0=py3.8_cuda11.1_cudnn8.0.5_0
- pytorch-mutex=1.0=cuda
- pytz=2021.3=pyhd3eb1b0_0
- readline=8.1=h27cfd23_0
- requests=2.25.1=pyhd3eb1b0_0
- ruamel_yaml=0.15.100=py38h27cfd23_0
- scipy=1.7.1=py38h292c36d_2
- setuptools=52.0.0=py38h06a4308_0
- six=1.16.0=pyhd3eb1b0_0
- spades=3.13.0=0
- sqlite=3.36.0=hc218d9a_0
- tk=8.6.10=hbc83047_0
- torchaudio=0.8.0=py38
- torchvision=0.9.0=py38_cu111
- tqdm=4.61.2=pyhd3eb1b0_1
- typing_extensions=3.10.0.2=pyh06a4308_0
- urllib3=1.26.6=pyhd3eb1b0_1
- wheel=0.36.2=pyhd3eb1b0_0
- xz=5.2.5=h7b6447c_0
- yaml=0.2.5=h7b6447c_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.4.9=haebb681_0
- pip:
- joblib==1.1.0
- scikit-learn==1.0.1
- sklearn==0.0
- threadpoolctl==3.0.0
prefix: /home/yannisun/miniconda3