diff --git a/Project.toml b/Project.toml index 274231cf..0e325905 100644 --- a/Project.toml +++ b/Project.toml @@ -1,7 +1,7 @@ name = "IndividualDisplacements" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" authors = ["gaelforget "] -version = "0.3.9" +version = "0.3.10" [deps] Artifacts = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" diff --git a/examples/basics/random_flow_field.jl b/examples/basics/random_flow_field.jl index cc554030..8bec6f40 100644 --- a/examples/basics/random_flow_field.jl +++ b/examples/basics/random_flow_field.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.7 +# v0.19.11 using Markdown using InteractiveUtils @@ -222,23 +222,23 @@ IndividualDisplacements = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" [compat] -CairoMakie = "~0.7.2" -IndividualDisplacements = "~0.3.8" -PlutoUI = "~0.7.32" +CairoMakie = "~0.8.13" +IndividualDisplacements = "~0.3.9" +PlutoUI = "~0.7.39" """ # ╔═╡ 00000000-0000-0000-0000-000000000002 PLUTO_MANIFEST_TOML_CONTENTS = """ # This file is machine-generated - editing it directly is not advised -julia_version = "1.7.0" +julia_version = "1.7.2" manifest_format = "2.0" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" +git-tree-sha1 = "69f7020bd72f069c219b5e8c236c1fa90d2cb409" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.1.0" +version = "1.2.1" [[deps.AbstractPlutoDingetjes]] deps = ["Pkg"] @@ -247,15 +247,15 @@ uuid = "6e696c72-6542-2067-7265-42206c756150" version = "1.1.4" [[deps.AbstractTrees]] -git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" +git-tree-sha1 = "5c0b629df8a5566a06f5fef5100b53ea56e465a0" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" -version = "0.3.4" +version = "0.4.2" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" +git-tree-sha1 = "195c5505521008abea5aee4f96930717958eac6f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.3" +version = "3.4.0" [[deps.Animations]] deps = ["Colors"] @@ -273,10 +273,40 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"] +git-tree-sha1 = "0582b5976fc76523f77056e888e454f0f7732596" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "6.0.22" + +[[deps.ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "40debc9f72d0511e12d817c7ca06a721b6423ba3" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.17" + +[[deps.ArrayInterfaceGPUArrays]] +deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] +git-tree-sha1 = "febba7add2873aecc0b6620b55969e73ec875bce" +uuid = "6ba088a2-8465-4c0a-af30-387133b534db" +version = "0.2.1" + +[[deps.ArrayInterfaceOffsetArrays]] +deps = ["ArrayInterface", "OffsetArrays", "Static"] +git-tree-sha1 = "c49f6bad95a30defff7c637731f00934c7289c50" +uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826" +version = "0.1.6" + +[[deps.ArrayInterfaceStaticArrays]] +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] +git-tree-sha1 = "efb000a9f643f018d5154e56814e338b5746c560" +uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" +version = "0.1.4" + +[[deps.ArrayInterfaceStaticArraysCore]] +deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "a1e2cf6ced6505cbad2490532388683f1e88c3ed" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.0" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -298,9 +328,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" +git-tree-sha1 = "eaee37f76339077f86679787a71990c4e465477f" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.2" +version = "0.1.4" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -309,27 +339,27 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" [[deps.CEnum]] -git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.1" +version = "0.4.2" [[deps.CFTime]] deps = ["Dates", "Printf"] -git-tree-sha1 = "bca6cb6ee746e6485ca4535f6cc29cf3579a0f20" +git-tree-sha1 = "ed2e76c1c3c43fd9d0cb9248674620b29d71f2d1" uuid = "179af706-886a-5703-950a-314cd64e0468" -version = "0.1.1" +version = "0.1.2" [[deps.CPUSummary]] -deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" +deps = ["CpuId", "IfElse", "Static"] +git-tree-sha1 = "8a43595f7b3f7d6dd1e07ad9b94081e1975df4af" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.7" +version = "0.1.25" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "9519274b50500b8029973d241d32cfbf0b127d97" +git-tree-sha1 = "873fb188a4b9d76549b81465b1f75c82aaf59238" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.2" +version = "0.10.4" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] @@ -338,10 +368,10 @@ uuid = "159f3aea-2a34-519c-b102-8c37f9878175" version = "1.0.5" [[deps.CairoMakie]] -deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" +deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA"] +git-tree-sha1 = "387e0102f240244102814cf73fe9fbbad82b9e9e" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.7.2" +version = "0.8.13" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -349,6 +379,12 @@ git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" version = "1.16.1+1" +[[deps.Calculus]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" +uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" +version = "0.5.1" + [[deps.CatViews]] deps = ["Random", "Test"] git-tree-sha1 = "23d1f1e10d4e24374112fcf800ac981d14a54b24" @@ -357,21 +393,21 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" +git-tree-sha1 = "80ca332f6dcb2508adba68f22f551adb2d00a624" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.12.0" +version = "1.15.3" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1" +git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.2" +version = "0.1.4" [[deps.CloseOpenIntervals]] deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "7b8f09d58294dc8aa13d91a8544b37c8a1dcbc06" +git-tree-sha1 = "5522c338564580adf5d58d91e43a55db0fa5fb39" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.4" +version = "0.1.10" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -386,22 +422,22 @@ uuid = "a2cac450-b92f-5266-8821-25eda20663c8" version = "0.4.0" [[deps.ColorSchemes]] -deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random"] +git-tree-sha1 = "1fd869cc3875b57347f7027521f561cf46d1fcd8" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.16.0" +version = "3.19.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] -git-tree-sha1 = "024fe24d83e4a5bf5fc80501a314ce0d1aa35597" +git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" -version = "0.11.0" +version = "0.11.4" [[deps.ColorVectorSpace]] deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] -git-tree-sha1 = "3f1f500312161f1ae067abe07d13b40f78f32e07" +git-tree-sha1 = "d08c20eef1f2cbc6e60fd3612ac4340b89fea322" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.9.8" +version = "0.9.9" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -410,9 +446,9 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.8" [[deps.CommonSolve]] -git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f" +git-tree-sha1 = "332a332c97c7071600984b3c31d9067e1a4e6e25" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.0" +version = "0.2.1" [[deps.CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -422,9 +458,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "44c37b4636bc54afac5c574d2d02b625349d6582" +git-tree-sha1 = "78bee250c6826e1cf805a88b7f1e86025275d208" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.41.0" +version = "3.46.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -432,15 +468,20 @@ uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f74e9d5388b8620b4cee35d4c5a618dd4dc547f4" +git-tree-sha1 = "fb21ddd70a051d882a1686a5a550990bbe371a95" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.3.0" +version = "1.4.1" [[deps.Contour]] -deps = ["StaticArrays"] -git-tree-sha1 = "9f02045d934dc030edad45944ea80dbd1f0ebea7" +git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.5.7" +version = "0.6.2" + +[[deps.CpuId]] +deps = ["Markdown"] +git-tree-sha1 = "fcbb72b032692610bfbdb15018ac16a36cf2e406" +uuid = "adafc99b-e345-5852-983c-f28acb93d879" +version = "0.3.1" [[deps.Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" @@ -452,28 +493,22 @@ git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" uuid = "6023044f-b3ef-4c22-8399-3ec90a0c9b75" version = "0.5.0" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "31186e61936fbbccb41d809ad4338c9f7addf7ae" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.0" - [[deps.DataAPI]] -git-tree-sha1 = "cc70b17275652eb47bc9e5f81635981f13cea5c8" +git-tree-sha1 = "fb5f5316dd3fd4c5e7c30a24d50643b73e37cd40" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.9.0" +version = "1.10.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" +git-tree-sha1 = "daa21eb85147f72e41f6352a57fccea377e310a9" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.2" +version = "1.3.4" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3daef5523dd2e769dad2365274f760ff5f282c7d" +git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.11" +version = "0.18.13" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -495,10 +530,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" +deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "665832fd81cd961aad28fa7009d4aaa23a07db57" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.81.3" +version = "6.98.2" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -508,14 +543,15 @@ version = "1.0.3" [[deps.DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" +git-tree-sha1 = "992a23afdb109d0d2f8802a30cf5ae4b1fe7ea68" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.1" +version = "1.11.1" [[deps.DiskArrays]] -git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" +deps = ["OffsetArrays"] +git-tree-sha1 = "230d999fc78652ea070312373ed1bfe2489e4fe5" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.3.0" +version = "0.3.6" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -529,43 +565,48 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" +git-tree-sha1 = "334a5896c1534bb1aa7aa2a642d30ba7707357ef" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.42" +version = "0.25.68" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "5158c2b41018c5f7eb1470d558127ac274eca0c9" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.1" [[deps.Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" +[[deps.DualNumbers]] +deps = ["Calculus", "NaNMath", "SpecialFunctions"] +git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" +uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" +version = "0.6.8" + [[deps.EarCut_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3f3a2501fa7236e9b911e0f7a588c657e822bb6d" uuid = "5ae413db-bbd1-5e63-b57d-d24a61df00f5" version = "2.2.3+0" -[[deps.EllipsisNotation]] -deps = ["ArrayInterface"] -git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" -uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.3.0" - [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "b3bfd02e98aedfa5cf885665493c5598c350cd2f" +git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.2.10+0" +version = "2.4.8+0" [[deps.ExponentialUtilities]] -deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" +deps = ["ArrayInterfaceCore", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "b40c9037e1a33990466bc5d224ced34b34eebdb0" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.11.0" +version = "1.18.0" + +[[deps.Extents]] +git-tree-sha1 = "5e1e4c53fa39afe63a7d356e30452249365fba99" +uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" +version = "0.1.1" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -574,16 +615,16 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "d8a578692e3077ac998b50c0217dfd67f21d1e5f" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "ccd479984c7838684b3ac204b716c89955c76623" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.0+0" +version = "4.4.2+0" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "463cb335fa22c4ebacfd1faba5fde14edb80d96c" +git-tree-sha1 = "90630efff0894f8142308e334473eba54c433549" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.4.5" +version = "1.5.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -592,39 +633,45 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" +deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] +git-tree-sha1 = "21cdeff41e5a1822c2acd7fc7934c5f450588e00" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.12" +version = "0.2.1" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "cfd9d0dbb947181644c00bd7e988b4bb30a5b2a5" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.6" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" +git-tree-sha1 = "94f5101b96d2d968ace56f7f2db19d0a5f592e28" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.12.0" +version = "1.15.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] -git-tree-sha1 = "04d13bfa8ef11720c24e4d840c0033d145537df7" +git-tree-sha1 = "316daa94fad0b7a008ebd573e002efd6609d85ac" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" -version = "0.9.17" +version = "0.9.19" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "8756f9935b7ccc9064c6eef0bff0ad643df733a3" +git-tree-sha1 = "246621d23d1f43e3b9c368bf3b72b2331a27c286" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.7" +version = "0.13.2" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" +deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "5a2cff9b6b77b33b89f3d97a4d367747adce647e" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.10.0" +version = "2.15.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -646,9 +693,9 @@ version = "0.4.2" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" +git-tree-sha1 = "187198a4ed8ccd7b5d99c41b69c679269ea2b2d4" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.25" +version = "0.10.32" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -663,10 +710,10 @@ uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" version = "2.10.4+0" [[deps.FreeTypeAbstraction]] -deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics", "StaticArrays"] -git-tree-sha1 = "770050893e7bc8a34915b4b9298604a3236de834" +deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"] +git-tree-sha1 = "b5c7fe9cea653443736d264b85466bad8c574f4a" uuid = "663a7486-cb36-511b-a19d-713bb74d65c9" -version = "0.9.5" +version = "0.9.9" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -679,15 +726,39 @@ git-tree-sha1 = "241552bc2209f0fa068b6415b1942cc0aa486bcc" uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" version = "1.1.2" +[[deps.FunctionWrappersWrappers]] +deps = ["FunctionWrappers"] +git-tree-sha1 = "a5e6e7f12607e90d71b09e6ce2c965e41b337968" +uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" +version = "0.1.1" + [[deps.Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" +[[deps.GPUArraysCore]] +deps = ["Adapt"] +git-tree-sha1 = "6872f5ec8fd1a38880f027a26739d42dcda6691f" +uuid = "46192b85-c4d5-4398-a991-12ede77f4527" +version = "0.1.2" + +[[deps.GenericSchur]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "fb69b2a645fa69ba5f474af09221b9308b160ce6" +uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" +version = "0.5.3" + +[[deps.GeoInterface]] +deps = ["Extents"] +git-tree-sha1 = "fb28b5dc239d0174d7297310ef7b84a11804dfab" +uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" +version = "1.0.1" + [[deps.GeometryBasics]] -deps = ["EarCut_jll", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "58bcdf5ebc057b085e58d95c138725628dd7453c" +deps = ["EarCut_jll", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "a7a97895780dab1085a97769316aa348830dc991" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.1" +version = "0.4.3" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -703,9 +774,9 @@ version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] -git-tree-sha1 = "1c5a84319923bea76fa145d49e93aa4394c73fc2" +git-tree-sha1 = "d61890399bc535850c4bf08e4e0d3a7ad0f21cbd" uuid = "a2bd30eb-e257-5431-a919-1863eab51364" -version = "1.1.1" +version = "1.1.2" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -715,15 +786,15 @@ version = "1.3.14+0" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" +git-tree-sha1 = "a6d30bdc378d340912f48abf01281aab68c0dec8" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.5.1" +version = "1.7.2" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "70938436e2720e6cb8a7f2ca9f1bbdbf40d7f5d0" +git-tree-sha1 = "53c7e69a6ffeb26bd594f5a1421b889e7219eeaa" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.6.4" +version = "0.9.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -732,9 +803,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" +git-tree-sha1 = "c003b31e2e818bc512b0ff99d7dce03b0c1359f5" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.1+0" +version = "1.12.2+1" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -744,21 +815,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" +git-tree-sha1 = "b7b88a4716ac33fe31d6556c02fc60017594343c" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.6" +version = "0.1.8" -[[deps.Hwloc]] -deps = ["Hwloc_jll"] -git-tree-sha1 = "92d99146066c5c6888d5a3abc871e6a214388b91" -uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" -version = "2.0.0" - -[[deps.Hwloc_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" -uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.7.0+0" +[[deps.HypergeometricFunctions]] +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] +git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" +version = "0.3.11" [[deps.Hyperscript]] deps = ["Test"] @@ -767,9 +832,10 @@ uuid = "47d2ed2b-36de-50cf-bf87-49c2cf4b8b91" version = "0.0.4" [[deps.HypertextLiteral]] -git-tree-sha1 = "2b078b5a615c6c0396c77810d92ee8c6f470d238" +deps = ["Tricks"] +git-tree-sha1 = "c47c5fa4c5308f27ccaac35504858d8914e102f9" uuid = "ac1192a8-f4b3-4bfe-ba22-af5b92cd3ab2" -version = "0.9.3" +version = "0.9.4" [[deps.IOCapture]] deps = ["Logging", "Random"] @@ -784,15 +850,15 @@ version = "0.1.1" [[deps.ImageCore]] deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Graphics", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "Reexport"] -git-tree-sha1 = "9a5c62f231e5bba35695a20988fc7cd6de7eeb5a" +git-tree-sha1 = "acf614720ef026d38400b3817614c45882d75500" uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" -version = "0.9.3" +version = "0.9.4" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" +deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "342f789fd041a55166764c351da1710db97ce0e0" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.0" +version = "0.6.6" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -807,20 +873,20 @@ version = "1.0.0" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" +git-tree-sha1 = "025aa6e551a577d2ce282054502a16347c17b7f5" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.8" +version = "0.3.9" [[deps.Inflate]] -git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" +git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" -version = "0.1.2" +version = "0.1.3" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" +git-tree-sha1 = "d19f9edd8c34760dca2de2b503f969d8700ed288" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.2" +version = "1.1.4" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -833,22 +899,22 @@ deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.Interpolations]] -deps = ["AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] -git-tree-sha1 = "b15fc0a95c564ca2e0a7ae12c1f095ca848ceb31" +deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] +git-tree-sha1 = "64f138f9453a018c8f3562e7bae54edc059af249" uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" -version = "0.13.5" +version = "0.14.4" [[deps.IntervalSets]] -deps = ["Dates", "EllipsisNotation", "Statistics"] -git-tree-sha1 = "3cc368af3f110a767ac786560045dceddfc16758" +deps = ["Dates", "Random", "Statistics"] +git-tree-sha1 = "076bb0da51a8c8d1229936a1af7bdfacd65037e1" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.5.3" +version = "0.7.2" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "a7254c0acd8e62f1ac75ad24d5db43f5f19f3c65" +git-tree-sha1 = "b3364212fb5d870f724876ffcd34dd8ec6d98918" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.2" +version = "0.1.7" [[deps.InvertedIndices]] git-tree-sha1 = "bee5f1ef5bf65df56bdd2e40447590b272a5471f" @@ -884,39 +950,51 @@ version = "1.0.0" [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" 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["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -935,22 +1013,21 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.7.0" - [[deps.LayoutPointers]] -deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" +deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] +git-tree-sha1 = "b67e749fb35530979839e7b4b606a97105fe4f1c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.5" +version = "0.1.10" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" 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"a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "af8c2f07401cb3c39ad05542adf053314ea37ec8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.11.1" +version = "1.25.0" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" +git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.6" +version = "0.3.18" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", 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"LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "5455aef09b40e5020e1520f551fa3135040d4ed0" +git-tree-sha1 = "41d162ae9c868218b1f3fe78cba878aa348c2d26" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2021.1.1+2" +version = "2022.1.0+0" [[deps.MacroTools]] deps = ["Markdown", "Random"] @@ -1050,21 +1127,21 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "b0323393a7190c9bf5b03af442fc115756df8e59" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.16.3" +version = "0.17.13" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" +git-tree-sha1 = "fbf705d2bdea8fc93f1ae8ca2965d8e03d4ca98c" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.2.1" +version = "0.4.0" [[deps.ManualMemory]] -git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" +git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" -version = "0.1.6" +version = "0.1.8" [[deps.MappedArrays]] git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" @@ -1082,9 +1159,9 @@ version = "1.2.0" [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "Test"] -git-tree-sha1 = "70e733037bbf02d691e78f95171a1fa08cdc6332" +git-tree-sha1 = "114ef48a73aea632b8aebcb84f796afcc510ac7c" uuid = "0a4f8689-d25c-4efe-a92b-7142dfc1aa53" -version = "0.2.1" +version = "0.4.3" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] @@ -1132,27 +1209,28 @@ uuid = 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-git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.802.101+0" +version = "400.902.5+1" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1164,21 +1242,21 @@ version = "1.0.2" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] -deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" +deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] +git-tree-sha1 = 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+version = "1.1.17+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1230,10 +1308,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "4cf346be836dcafdfa8359fc0f593ad5860ba7cf" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.6.5" +version = "6.24.4" [[deps.PCRE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1243,15 +1321,15 @@ version = "8.44.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "ee26b350276c51697c9c2d88a072b339f9f03d73" +git-tree-sha1 = "cf494dca75a69712a72b80bc48f59dcf3dea63ec" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.5" +version = "0.11.16" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "6d105d40e30b635cfed9d52ec29cf456e27d38f8" +git-tree-sha1 = "e925a64b8585aa9f4e3047b8d2cdc3f0e79fd4e4" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.12" +version = "0.3.16" [[deps.Packing]] deps = ["GeometryBasics"] @@ -1267,9 +1345,9 @@ version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9bc1871464b12ed19297fbc56c4fb4ba84988b0d" +git-tree-sha1 = "3a121dfbba67c94a5bec9dde613c3d0cbcf3a12b" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.47.0+0" +version = "1.50.3+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1279,9 +1357,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" +git-tree-sha1 = "3d5bf43e3e8b412656404ed9466f1dcbf7c50269" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.2.1" +version = "2.4.0" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1295,33 +1373,33 @@ uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" [[deps.PkgVersion]] deps = ["Pkg"] -git-tree-sha1 = "a7a7e1a88853564e551e4eba8650f8c38df79b37" +git-tree-sha1 = "f6cf8e7944e50901594838951729a1861e668cb8" uuid = "eebad327-c553-4316-9ea0-9fa01ccd7688" -version = "0.1.1" +version = "0.3.2" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" +git-tree-sha1 = "9888e59493658e476d3073f1ce24348bdc086660" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.3" +version = "1.3.0" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] -git-tree-sha1 = "ae6145ca68947569058866e443df69587acc1806" +git-tree-sha1 = "8d1f54886b9037091edf146b517989fc4a09efec" uuid = "7f904dfe-b85e-4ff6-b463-dae2292396a8" -version = "0.7.32" +version = "0.7.39" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" +git-tree-sha1 = "94e20822bd7427b1b1b843a3980003f5d5e8696b" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.3" +version = "0.6.14" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" +git-tree-sha1 = "233feae14c07cca6b95080f77a7d332612603f6a" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.3" +version = "0.1.9" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1330,21 +1408,21 @@ version = "0.1.2" [[deps.PooledArrays]] deps = ["DataAPI", "Future"] -git-tree-sha1 = "db3a23166af8aebf4db5ef87ac5b00d36eb771e2" +git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "1.4.0" +version = "1.4.2" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" +deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff", "ReverseDiff"] +git-tree-sha1 = "5c076a409ec8d2a86d3685a7e4fed330cd489889" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.3" +version = "0.4.2" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" +git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.3" +version = "1.3.0" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] @@ -1358,9 +1436,9 @@ uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" [[deps.ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" +git-tree-sha1 = "d7a7aef8f8f2d537104f170139553b14dfe39fe9" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.7.1" +version = "1.7.2" [[deps.QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1384,9 +1462,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Ratios]] deps = ["Requires"] -git-tree-sha1 = "01d341f502250e81f6fec0afe662aa861392a3aa" +git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.2" +version = "0.4.3" [[deps.RecipesBase]] git-tree-sha1 = "6bf3f380ff52ce0832ddd3a2a7b9538ed1bcca7d" @@ -1394,16 +1472,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "3004608dc42101a944e44c1c68b599fa7c669080" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.24.1" +version = "2.32.0" [[deps.RecursiveFactorization]] -deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" +deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] +git-tree-sha1 = "0a2dfb3358fcde3676beb75405e782faa8c9aded" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.9" +version = "0.2.12" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1412,9 +1490,9 @@ version = "1.2.2" [[deps.RelocatableFolders]] deps = ["SHA", "Scratch"] -git-tree-sha1 = "cdbd3b1338c72ce29d9584fdbe9e9b70eeb5adca" +git-tree-sha1 = "22c5201127d7b243b9ee1de3b43c408879dff60f" uuid = "05181044-ff0b-4ac5-8273-598c1e38db00" -version = "0.1.3" +version = "0.3.0" [[deps.Requires]] deps = ["UUIDs"] @@ -1422,6 +1500,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" +[[deps.ReverseDiff]] +deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] +git-tree-sha1 = "b8e2eb3d8e1530acb73d8949eab3cedb1d43f840" +uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" +version = "1.14.1" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "bf3188feca147ce108c76ad82c2792c57abe7b1f" @@ -1438,15 +1522,15 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" +git-tree-sha1 = "7dbc15af7ed5f751a82bf3ed37757adf76c32402" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.4.0" +version = "3.4.1" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "62c2da6eb66de8bb88081d20528647140d4daa0e" +git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.0" +version = "0.1.1" [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" @@ -1455,42 +1539,42 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "1410aad1c6b35862573c01b96cd1f6dbe3979994" +git-tree-sha1 = "2ba4fee025f25d6711487b73e1ac177cbd127913" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.28" +version = "0.6.35" [[deps.ScanByte]] deps = ["Libdl", "SIMD"] -git-tree-sha1 = "9cc2955f2a254b18be655a4ee70bc4031b2b189e" +git-tree-sha1 = "2436b15f376005e8790e318329560dcc67188e84" uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb" -version = "0.3.0" +version = "0.3.3" [[deps.SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "adbb628d4116d9d87e41b6d678772c44877d442c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.26.1" +version = "1.52.0" [[deps.Scratch]] deps = ["Dates"] -git-tree-sha1 = "0b4b7f1393cff97c33891da2a0bf69c6ed241fda" +git-tree-sha1 = "f94f779c94e58bf9ea243e77a37e16d9de9126bd" uuid = "6c6a2e73-6563-6170-7368-637461726353" -version = "1.1.0" +version = "1.1.1" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" +git-tree-sha1 = "db8481cf5d6278a121184809e9eb1628943c7704" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.11" +version = "1.3.13" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "0afd9e6c623e379f593da01f20590bacc26d1d14" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.1" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1520,6 +1604,11 @@ git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" version = "0.1.2" +[[deps.SnoopPrecompile]] +git-tree-sha1 = "f604441450a3c0569830946e5b33b78c928e1a85" +uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" +version = "1.0.1" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1534,16 +1623,16 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] -deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] +git-tree-sha1 = "5fb8ba9180f467885e87a2c99cae178b67934be1" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.20.0" +version = "1.26.2" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" +git-tree-sha1 = "d75bda01f8c31ebb72df80a46c88b25d1c79c56d" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.1.0" +version = "2.1.7" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1553,48 +1642,54 @@ version = "0.1.1" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f94f9d627ba3f91e41a815b9f9f977d729e2e06f" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.7.6" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" +deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "dfec37b90740e3b9aa5dc2613892a3fc155c3b42" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.3.3" +version = "1.5.6" + +[[deps.StaticArraysCore]] +git-tree-sha1 = "ec2bd695e905a3c755b33026954b119ea17f2d22" +uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" +version = "1.3.0" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" +deps = ["LinearAlgebra"] +git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.2.0" +version = "1.5.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" +git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.14" +version = "0.33.21" [[deps.StatsFuns]] -deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" +deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] +git-tree-sha1 = "5783b877201a82fc0014cbf381e7e6eb130473a4" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.15" +version = "1.0.1" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "12cf3253ebd8e2a3214ae171fbfe51e7e8d8ad28" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] +git-tree-sha1 = "ac730bd978bf35f9fe45daa0bd1f51e493e97eb4" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.2.9" +version = "0.3.15" [[deps.StructArrays]] -deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" +deps = ["Adapt", "DataAPI", "StaticArraysCore", "Tables"] +git-tree-sha1 = "8c6ac65ec9ab781af05b08ff305ddc727c25f680" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.4" +version = "0.6.12" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -1615,10 +1710,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] -git-tree-sha1 = "bb1064c9a84c52e277f1096cf41434b675cd368b" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] +git-tree-sha1 = "5ce79ce186cc678bbb5c5681ca3379d1ddae11a1" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.6.1" +version = "1.7.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1636,33 +1731,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" +git-tree-sha1 = "f8629df51cab659d70d2e5618a430b4d3f37f2c3" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.7" +version = "0.5.0" [[deps.TiffImages]] -deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] +git-tree-sha1 = "70e6d2da9210371c927176cb7a56d41ef1260db7" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.3" +version = "0.6.1" [[deps.TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "216b95ea110b5972db65aa90f88d8d89dcb8851c" +git-tree-sha1 = "8a75929dcd3c38611db2f8d08546decb514fcadf" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.6" - -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" +version = "0.9.9" [[deps.TriangularSolve]] -deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" +deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"] +git-tree-sha1 = "8987cf4a0f8d6c375e4ab1438a048e0a185151e4" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.9" +version = "0.1.13" + +[[deps.Tricks]] +git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.6" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1684,15 +1778,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" +git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.10.1" +version = "1.11.0" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] +git-tree-sha1 = "05be19531ae910fb482db2d4c45e1aa1cde50560" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.24" +version = "0.21.47" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1702,9 +1796,9 @@ version = "0.2.0" [[deps.WeakRefStrings]] deps = ["DataAPI", "InlineStrings", "Parsers"] -git-tree-sha1 = "c69f9da3ff2f4f02e811c3323c22e5dfcb584cfa" +git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23" uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" -version = "1.4.1" +version = "1.4.2" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1714,9 +1808,9 @@ version = "0.5.5" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a" +git-tree-sha1 = "58443b63fb7e465a8a7210828c91c08b92132dff" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.12+0" +version = "2.9.14+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -1783,10 +1877,16 @@ uuid = "700de1a5-db45-46bc-99cf-38207098b444" version = "0.2.2" [[deps.isoband_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "a1ac99674715995a536bbce674b068ec1b7d893d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c" uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" -version = "0.2.2+0" +version = "0.2.3+0" + +[[deps.libaom_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" +uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" +version = "3.4.0+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] @@ -1861,6 +1961,6 @@ version = "3.5.0+0" # ╟─67c39f1e-8aa5-4fad-a0b8-a7fca1b17c36 # ╟─feb874c4-80dd-444f-beb5-90b90647d44d # ╟─e927ba74-2c88-493e-b25b-910e23a63045 -# ╠═ef8cbf8e-3e10-4615-9640-86cb8bc68288 +# ╟─ef8cbf8e-3e10-4615-9640-86cb8bc68288 # ╟─00000000-0000-0000-0000-000000000001 # ╟─00000000-0000-0000-0000-000000000002 diff --git a/examples/basics/solid_body_rotation.jl b/examples/basics/solid_body_rotation.jl index ca32d213..78fab20f 100644 --- a/examples/basics/solid_body_rotation.jl +++ b/examples/basics/solid_body_rotation.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.7 +# v0.19.11 using Markdown using InteractiveUtils @@ -89,7 +89,7 @@ Here just one individual is initialized at [np*1/3,np*1/3,nz*1/3] in the three-d # ╔═╡ c60a48e0-6f51-44b0-bd6e-332e04d2d332 begin (x,y,z)=(np*1/3,np*1/3,nz*1/3) - 𝐼=Individuals(𝐹,x,y,z) + 𝐼=Individuals(𝐹,x,y,z,(∫=IndividualDisplacements.default_solver,)) end # ╔═╡ 45762eb1-7404-4524-8d1d-788a70f8f5ef @@ -219,25 +219,25 @@ MeshArrays = "cb8c808f-1acf-59a3-9d2b-6e38d009f683" PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" [compat] -CairoMakie = "~0.7.2" -DataFrames = "~1.3.2" -IndividualDisplacements = "~0.3.8" +CairoMakie = "~0.8.13" +DataFrames = "~1.3.4" +IndividualDisplacements = "~0.3.9" MeshArrays = "~0.2.31" -PlutoUI = "~0.7.32" +PlutoUI = "~0.7.39" """ # ╔═╡ 00000000-0000-0000-0000-000000000002 PLUTO_MANIFEST_TOML_CONTENTS = """ # This file is machine-generated - editing it directly is not advised -julia_version = "1.7.0" +julia_version = "1.7.2" manifest_format = "2.0" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" +git-tree-sha1 = "69f7020bd72f069c219b5e8c236c1fa90d2cb409" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.1.0" +version = "1.2.1" [[deps.AbstractPlutoDingetjes]] deps = ["Pkg"] @@ -246,15 +246,15 @@ uuid = "6e696c72-6542-2067-7265-42206c756150" version = "1.1.4" [[deps.AbstractTrees]] -git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" +git-tree-sha1 = "5c0b629df8a5566a06f5fef5100b53ea56e465a0" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" -version = "0.3.4" +version = "0.4.2" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" +git-tree-sha1 = "195c5505521008abea5aee4f96930717958eac6f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.3" +version = "3.4.0" [[deps.Animations]] deps = ["Colors"] @@ -272,10 +272,40 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"] +git-tree-sha1 = "0582b5976fc76523f77056e888e454f0f7732596" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "6.0.22" + +[[deps.ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "40debc9f72d0511e12d817c7ca06a721b6423ba3" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.17" + +[[deps.ArrayInterfaceGPUArrays]] +deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] +git-tree-sha1 = "febba7add2873aecc0b6620b55969e73ec875bce" +uuid = "6ba088a2-8465-4c0a-af30-387133b534db" +version = "0.2.1" + +[[deps.ArrayInterfaceOffsetArrays]] +deps = ["ArrayInterface", "OffsetArrays", "Static"] +git-tree-sha1 = "c49f6bad95a30defff7c637731f00934c7289c50" +uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826" +version = "0.1.6" + +[[deps.ArrayInterfaceStaticArrays]] +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] +git-tree-sha1 = "efb000a9f643f018d5154e56814e338b5746c560" +uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" +version = "0.1.4" + +[[deps.ArrayInterfaceStaticArraysCore]] +deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "a1e2cf6ced6505cbad2490532388683f1e88c3ed" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.0" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -297,9 +327,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" +git-tree-sha1 = "eaee37f76339077f86679787a71990c4e465477f" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.2" +version = "0.1.4" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -308,27 +338,27 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" [[deps.CEnum]] -git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.1" +version = "0.4.2" [[deps.CFTime]] deps = ["Dates", "Printf"] -git-tree-sha1 = "bca6cb6ee746e6485ca4535f6cc29cf3579a0f20" +git-tree-sha1 = "ed2e76c1c3c43fd9d0cb9248674620b29d71f2d1" uuid = "179af706-886a-5703-950a-314cd64e0468" -version = "0.1.1" +version = "0.1.2" [[deps.CPUSummary]] -deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" +deps = ["CpuId", "IfElse", "Static"] +git-tree-sha1 = "8a43595f7b3f7d6dd1e07ad9b94081e1975df4af" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.7" +version = "0.1.25" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "9519274b50500b8029973d241d32cfbf0b127d97" +git-tree-sha1 = "873fb188a4b9d76549b81465b1f75c82aaf59238" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.2" +version = "0.10.4" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] @@ -337,10 +367,10 @@ uuid = "159f3aea-2a34-519c-b102-8c37f9878175" version = "1.0.5" [[deps.CairoMakie]] -deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" +deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA"] +git-tree-sha1 = "387e0102f240244102814cf73fe9fbbad82b9e9e" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.7.2" +version = "0.8.13" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -348,6 +378,12 @@ git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" version = "1.16.1+1" +[[deps.Calculus]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" +uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" +version = "0.5.1" + [[deps.CatViews]] deps = ["Random", "Test"] git-tree-sha1 = "23d1f1e10d4e24374112fcf800ac981d14a54b24" @@ -356,21 +392,21 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" +git-tree-sha1 = "80ca332f6dcb2508adba68f22f551adb2d00a624" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.12.0" +version = "1.15.3" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1" +git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.2" +version = "0.1.4" [[deps.CloseOpenIntervals]] deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "7b8f09d58294dc8aa13d91a8544b37c8a1dcbc06" +git-tree-sha1 = "5522c338564580adf5d58d91e43a55db0fa5fb39" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.4" +version = "0.1.10" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -385,22 +421,22 @@ uuid = "a2cac450-b92f-5266-8821-25eda20663c8" version = "0.4.0" [[deps.ColorSchemes]] -deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random"] +git-tree-sha1 = "1fd869cc3875b57347f7027521f561cf46d1fcd8" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.16.0" +version = "3.19.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] -git-tree-sha1 = "024fe24d83e4a5bf5fc80501a314ce0d1aa35597" +git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" -version = "0.11.0" +version = "0.11.4" [[deps.ColorVectorSpace]] deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] -git-tree-sha1 = "3f1f500312161f1ae067abe07d13b40f78f32e07" +git-tree-sha1 = "d08c20eef1f2cbc6e60fd3612ac4340b89fea322" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.9.8" +version = "0.9.9" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -409,9 +445,9 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.8" [[deps.CommonSolve]] -git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f" +git-tree-sha1 = "332a332c97c7071600984b3c31d9067e1a4e6e25" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.0" +version = "0.2.1" [[deps.CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -421,9 +457,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "44c37b4636bc54afac5c574d2d02b625349d6582" +git-tree-sha1 = "78bee250c6826e1cf805a88b7f1e86025275d208" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.41.0" +version = "3.46.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -431,15 +467,20 @@ uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f74e9d5388b8620b4cee35d4c5a618dd4dc547f4" +git-tree-sha1 = "fb21ddd70a051d882a1686a5a550990bbe371a95" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.3.0" +version = "1.4.1" [[deps.Contour]] -deps = ["StaticArrays"] -git-tree-sha1 = "9f02045d934dc030edad45944ea80dbd1f0ebea7" +git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.5.7" +version = "0.6.2" + +[[deps.CpuId]] +deps = ["Markdown"] +git-tree-sha1 = "fcbb72b032692610bfbdb15018ac16a36cf2e406" +uuid = "adafc99b-e345-5852-983c-f28acb93d879" +version = "0.3.1" [[deps.Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" @@ -451,28 +492,22 @@ git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" uuid = "6023044f-b3ef-4c22-8399-3ec90a0c9b75" version = "0.5.0" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "31186e61936fbbccb41d809ad4338c9f7addf7ae" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.0" - [[deps.DataAPI]] -git-tree-sha1 = "cc70b17275652eb47bc9e5f81635981f13cea5c8" +git-tree-sha1 = "fb5f5316dd3fd4c5e7c30a24d50643b73e37cd40" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.9.0" +version = "1.10.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" +git-tree-sha1 = "daa21eb85147f72e41f6352a57fccea377e310a9" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.2" +version = "1.3.4" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3daef5523dd2e769dad2365274f760ff5f282c7d" +git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.11" +version = "0.18.13" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -494,10 +529,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" +deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "665832fd81cd961aad28fa7009d4aaa23a07db57" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.81.3" +version = "6.98.2" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -507,14 +542,15 @@ version = "1.0.3" [[deps.DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" +git-tree-sha1 = "992a23afdb109d0d2f8802a30cf5ae4b1fe7ea68" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.1" +version = "1.11.1" [[deps.DiskArrays]] -git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" +deps = ["OffsetArrays"] +git-tree-sha1 = "230d999fc78652ea070312373ed1bfe2489e4fe5" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.3.0" +version = "0.3.6" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -528,43 +564,48 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" +git-tree-sha1 = "334a5896c1534bb1aa7aa2a642d30ba7707357ef" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.42" +version = "0.25.68" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "5158c2b41018c5f7eb1470d558127ac274eca0c9" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.1" [[deps.Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" +[[deps.DualNumbers]] +deps = ["Calculus", "NaNMath", "SpecialFunctions"] +git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" +uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" +version = "0.6.8" + [[deps.EarCut_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3f3a2501fa7236e9b911e0f7a588c657e822bb6d" uuid = "5ae413db-bbd1-5e63-b57d-d24a61df00f5" version = "2.2.3+0" -[[deps.EllipsisNotation]] -deps = ["ArrayInterface"] -git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" -uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.3.0" - [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "b3bfd02e98aedfa5cf885665493c5598c350cd2f" +git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.2.10+0" +version = "2.4.8+0" [[deps.ExponentialUtilities]] -deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" +deps = ["ArrayInterfaceCore", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "b40c9037e1a33990466bc5d224ced34b34eebdb0" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.11.0" +version = "1.18.0" + +[[deps.Extents]] +git-tree-sha1 = "5e1e4c53fa39afe63a7d356e30452249365fba99" +uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" +version = "0.1.1" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -573,16 +614,16 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "d8a578692e3077ac998b50c0217dfd67f21d1e5f" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "ccd479984c7838684b3ac204b716c89955c76623" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.0+0" +version = "4.4.2+0" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "463cb335fa22c4ebacfd1faba5fde14edb80d96c" +git-tree-sha1 = "90630efff0894f8142308e334473eba54c433549" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.4.5" +version = "1.5.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -591,39 +632,45 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" +deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] +git-tree-sha1 = "21cdeff41e5a1822c2acd7fc7934c5f450588e00" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.12" +version = "0.2.1" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "cfd9d0dbb947181644c00bd7e988b4bb30a5b2a5" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.6" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" +git-tree-sha1 = "94f5101b96d2d968ace56f7f2db19d0a5f592e28" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.12.0" +version = "1.15.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] -git-tree-sha1 = "04d13bfa8ef11720c24e4d840c0033d145537df7" +git-tree-sha1 = "316daa94fad0b7a008ebd573e002efd6609d85ac" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" -version = "0.9.17" +version = "0.9.19" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "8756f9935b7ccc9064c6eef0bff0ad643df733a3" +git-tree-sha1 = "246621d23d1f43e3b9c368bf3b72b2331a27c286" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.7" +version = "0.13.2" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" +deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "5a2cff9b6b77b33b89f3d97a4d367747adce647e" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.10.0" +version = "2.15.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -645,9 +692,9 @@ version = "0.4.2" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" +git-tree-sha1 = "187198a4ed8ccd7b5d99c41b69c679269ea2b2d4" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.25" +version = "0.10.32" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -662,10 +709,10 @@ uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" version = "2.10.4+0" [[deps.FreeTypeAbstraction]] -deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics", "StaticArrays"] -git-tree-sha1 = "770050893e7bc8a34915b4b9298604a3236de834" +deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"] +git-tree-sha1 = "b5c7fe9cea653443736d264b85466bad8c574f4a" uuid = "663a7486-cb36-511b-a19d-713bb74d65c9" -version = "0.9.5" +version = "0.9.9" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -678,15 +725,39 @@ git-tree-sha1 = "241552bc2209f0fa068b6415b1942cc0aa486bcc" uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" version = "1.1.2" +[[deps.FunctionWrappersWrappers]] +deps = ["FunctionWrappers"] +git-tree-sha1 = "a5e6e7f12607e90d71b09e6ce2c965e41b337968" +uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" +version = "0.1.1" + [[deps.Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" +[[deps.GPUArraysCore]] +deps = ["Adapt"] +git-tree-sha1 = "6872f5ec8fd1a38880f027a26739d42dcda6691f" +uuid = "46192b85-c4d5-4398-a991-12ede77f4527" +version = "0.1.2" + +[[deps.GenericSchur]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "fb69b2a645fa69ba5f474af09221b9308b160ce6" +uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" +version = "0.5.3" + +[[deps.GeoInterface]] +deps = ["Extents"] +git-tree-sha1 = "fb28b5dc239d0174d7297310ef7b84a11804dfab" +uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" +version = "1.0.1" + [[deps.GeometryBasics]] -deps = ["EarCut_jll", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "58bcdf5ebc057b085e58d95c138725628dd7453c" +deps = ["EarCut_jll", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "a7a97895780dab1085a97769316aa348830dc991" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.1" +version = "0.4.3" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -702,9 +773,9 @@ version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] -git-tree-sha1 = "1c5a84319923bea76fa145d49e93aa4394c73fc2" +git-tree-sha1 = "d61890399bc535850c4bf08e4e0d3a7ad0f21cbd" uuid = "a2bd30eb-e257-5431-a919-1863eab51364" -version = "1.1.1" +version = "1.1.2" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -714,15 +785,15 @@ version = "1.3.14+0" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" +git-tree-sha1 = "a6d30bdc378d340912f48abf01281aab68c0dec8" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.5.1" +version = "1.7.2" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "70938436e2720e6cb8a7f2ca9f1bbdbf40d7f5d0" +git-tree-sha1 = "53c7e69a6ffeb26bd594f5a1421b889e7219eeaa" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.6.4" +version = "0.9.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -731,9 +802,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" +git-tree-sha1 = "c003b31e2e818bc512b0ff99d7dce03b0c1359f5" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.1+0" +version = "1.12.2+1" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -743,21 +814,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" +git-tree-sha1 = "b7b88a4716ac33fe31d6556c02fc60017594343c" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.6" +version = "0.1.8" -[[deps.Hwloc]] -deps = ["Hwloc_jll"] -git-tree-sha1 = "92d99146066c5c6888d5a3abc871e6a214388b91" -uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" -version = "2.0.0" - -[[deps.Hwloc_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" -uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.7.0+0" +[[deps.HypergeometricFunctions]] +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] +git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" +version = "0.3.11" [[deps.Hyperscript]] deps = ["Test"] @@ -766,9 +831,10 @@ uuid = "47d2ed2b-36de-50cf-bf87-49c2cf4b8b91" version = "0.0.4" [[deps.HypertextLiteral]] -git-tree-sha1 = "2b078b5a615c6c0396c77810d92ee8c6f470d238" +deps = ["Tricks"] +git-tree-sha1 = "c47c5fa4c5308f27ccaac35504858d8914e102f9" uuid = "ac1192a8-f4b3-4bfe-ba22-af5b92cd3ab2" -version = "0.9.3" +version = "0.9.4" [[deps.IOCapture]] deps = ["Logging", "Random"] @@ -783,15 +849,15 @@ version = "0.1.1" [[deps.ImageCore]] deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Graphics", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "Reexport"] -git-tree-sha1 = "9a5c62f231e5bba35695a20988fc7cd6de7eeb5a" +git-tree-sha1 = "acf614720ef026d38400b3817614c45882d75500" uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" -version = "0.9.3" +version = "0.9.4" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" +deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "342f789fd041a55166764c351da1710db97ce0e0" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.0" +version = "0.6.6" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -806,20 +872,20 @@ version = "1.0.0" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" +git-tree-sha1 = "025aa6e551a577d2ce282054502a16347c17b7f5" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.8" +version = "0.3.9" [[deps.Inflate]] -git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" +git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" -version = "0.1.2" +version = "0.1.3" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" +git-tree-sha1 = "d19f9edd8c34760dca2de2b503f969d8700ed288" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.2" +version = "1.1.4" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -832,22 +898,22 @@ deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.Interpolations]] -deps = ["AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] -git-tree-sha1 = "b15fc0a95c564ca2e0a7ae12c1f095ca848ceb31" +deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] +git-tree-sha1 = "64f138f9453a018c8f3562e7bae54edc059af249" uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" -version = "0.13.5" +version = "0.14.4" [[deps.IntervalSets]] -deps = ["Dates", "EllipsisNotation", "Statistics"] -git-tree-sha1 = "3cc368af3f110a767ac786560045dceddfc16758" +deps = ["Dates", "Random", "Statistics"] +git-tree-sha1 = "076bb0da51a8c8d1229936a1af7bdfacd65037e1" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.5.3" +version = "0.7.2" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "a7254c0acd8e62f1ac75ad24d5db43f5f19f3c65" +git-tree-sha1 = "b3364212fb5d870f724876ffcd34dd8ec6d98918" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.2" +version = "0.1.7" [[deps.InvertedIndices]] git-tree-sha1 = "bee5f1ef5bf65df56bdd2e40447590b272a5471f" @@ -883,39 +949,51 @@ version = "1.0.0" [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" +git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.4.0" +version = "1.4.1" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" +git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.2" +version = "0.21.3" + +[[deps.JpegTurbo]] +deps = ["CEnum", "FileIO", "ImageCore", "JpegTurbo_jll", "TOML"] +git-tree-sha1 = "a77b273f1ddec645d1b7c4fd5fb98c8f90ad10a5" +uuid = "b835a17e-a41a-41e7-81f0-2f016b05efe0" +version = "0.1.1" + +[[deps.JpegTurbo_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "b53380851c6e6664204efb2e62cd24fa5c47e4ba" +uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" +version = "2.1.2+0" [[deps.KLU]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] -git-tree-sha1 = "1ed18ccf6292d89abf85beba35b9399aeddff9b2" +git-tree-sha1 = "cae5e3dfd89b209e01bcd65b3a25e74462c67ee0" uuid = "ef3ab10e-7fda-4108-b977-705223b18434" -version = "0.2.3" +version = "0.3.0" [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "591e8dc09ad18386189610acafb970032c519707" +git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.3" +version = "0.6.5" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +git-tree-sha1 = "a2327039e1c84615e22d662adb3df113caf44b70" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.7.11" +version = "0.8.3" [[deps.KrylovKit]] deps = ["LinearAlgebra", "Printf"] -git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +git-tree-sha1 = "49b0c1dd5c292870577b8f58c51072bd558febb9" uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" -version = "0.5.3" +version = "0.5.4" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -934,22 +1012,21 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.7.0" - [[deps.LayoutPointers]] -deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" +deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] +git-tree-sha1 = "b67e749fb35530979839e7b4b606a97105fe4f1c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.5" +version = "0.1.10" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +[[deps.LazyModules]] +git-tree-sha1 = "a560dd966b386ac9ae60bdd3a3d3a326062d3c3e" +uuid = "8cdb02fc-e678-4876-92c5-9defec4f444e" +version = "0.3.1" + [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" @@ -1007,40 +1084,40 @@ version = "2.36.0+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "f27132e551e959b3667d8c93eae90973225032dd" +git-tree-sha1 = "7bbea35cec17305fc70a0e5b4641477dc0789d9d" uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.1.1" +version = "7.2.0" [[deps.LinearAlgebra]] deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] -git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "af8c2f07401cb3c39ad05542adf053314ea37ec8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.11.1" +version = "1.25.0" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" +git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.6" +version = "0.3.18" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" +deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "60613258cc56b6c7c909f3e960e8b3b4e86dc2f2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.101" +version = "0.12.124" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "5455aef09b40e5020e1520f551fa3135040d4ed0" +git-tree-sha1 = "41d162ae9c868218b1f3fe78cba878aa348c2d26" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2021.1.1+2" +version = "2022.1.0+0" [[deps.MacroTools]] deps = ["Markdown", "Random"] @@ -1049,21 +1126,21 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "b0323393a7190c9bf5b03af442fc115756df8e59" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.16.3" +version = "0.17.13" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" +git-tree-sha1 = "fbf705d2bdea8fc93f1ae8ca2965d8e03d4ca98c" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.2.1" +version = "0.4.0" [[deps.ManualMemory]] -git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" +git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" -version = "0.1.6" +version = "0.1.8" [[deps.MappedArrays]] git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" @@ -1081,9 +1158,9 @@ version = "1.2.0" [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "Test"] -git-tree-sha1 = "70e733037bbf02d691e78f95171a1fa08cdc6332" +git-tree-sha1 = "114ef48a73aea632b8aebcb84f796afcc510ac7c" uuid = "0a4f8689-d25c-4efe-a92b-7142dfc1aa53" -version = "0.2.1" +version = "0.4.3" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] @@ -1131,27 +1208,28 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" +deps = ["OpenLibm_jll"] +git-tree-sha1 = "a7c3d1da1189a1c2fe843a3bfa04d18d20eb3211" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.7" +version = "1.0.1" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] -git-tree-sha1 = "16baacfdc8758bc374882566c9187e785e85c2f0" +git-tree-sha1 = "0e353ed734b1747fc20cd4cba0edd9ac027eff6a" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.9" +version = "0.4.11" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" +git-tree-sha1 = "328178762645783b20495d408ab317b4c2d25b1a" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.4" +version = "0.11.7" [[deps.NetCDF_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.802.101+0" +version = "400.902.5+1" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1163,21 +1241,21 @@ version = "1.0.2" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] -deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" +deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] +git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.14" +version = "0.3.22" [[deps.Observables]] -git-tree-sha1 = "fe29afdef3d0c4a8286128d4e45cc50621b1e43d" +git-tree-sha1 = "dfd8d34871bc3ad08cd16026c1828e271d554db9" uuid = "510215fc-4207-5dde-b226-833fc4488ee2" -version = "0.4.0" +version = "0.5.1" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "043017e0bdeff61cfbb7afeb558ab29536bbb5ed" +git-tree-sha1 = "1ea784113a6aa054c5ebd95945fa5e52c2f378e7" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.10.8" +version = "1.12.7" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1207,9 +1285,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" +git-tree-sha1 = "e60321e3f2616584ff98f0a4f18d98ae6f89bbb3" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.13+0" +version = "1.1.17+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1229,10 +1307,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "4cf346be836dcafdfa8359fc0f593ad5860ba7cf" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.6.5" +version = "6.24.4" [[deps.PCRE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1242,15 +1320,15 @@ version = "8.44.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "ee26b350276c51697c9c2d88a072b339f9f03d73" +git-tree-sha1 = "cf494dca75a69712a72b80bc48f59dcf3dea63ec" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.5" +version = "0.11.16" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "6d105d40e30b635cfed9d52ec29cf456e27d38f8" +git-tree-sha1 = "e925a64b8585aa9f4e3047b8d2cdc3f0e79fd4e4" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.12" +version = "0.3.16" [[deps.Packing]] deps = ["GeometryBasics"] @@ -1266,9 +1344,9 @@ version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9bc1871464b12ed19297fbc56c4fb4ba84988b0d" +git-tree-sha1 = "3a121dfbba67c94a5bec9dde613c3d0cbcf3a12b" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.47.0+0" +version = "1.50.3+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1278,9 +1356,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" +git-tree-sha1 = "3d5bf43e3e8b412656404ed9466f1dcbf7c50269" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.2.1" +version = "2.4.0" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1294,33 +1372,33 @@ uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" [[deps.PkgVersion]] deps = ["Pkg"] -git-tree-sha1 = "a7a7e1a88853564e551e4eba8650f8c38df79b37" +git-tree-sha1 = "f6cf8e7944e50901594838951729a1861e668cb8" uuid = "eebad327-c553-4316-9ea0-9fa01ccd7688" -version = "0.1.1" +version = "0.3.2" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" +git-tree-sha1 = "9888e59493658e476d3073f1ce24348bdc086660" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.3" +version = "1.3.0" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] -git-tree-sha1 = "ae6145ca68947569058866e443df69587acc1806" +git-tree-sha1 = "8d1f54886b9037091edf146b517989fc4a09efec" uuid = "7f904dfe-b85e-4ff6-b463-dae2292396a8" -version = "0.7.32" +version = "0.7.39" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" +git-tree-sha1 = "94e20822bd7427b1b1b843a3980003f5d5e8696b" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.3" +version = "0.6.14" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" +git-tree-sha1 = "233feae14c07cca6b95080f77a7d332612603f6a" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.3" +version = "0.1.9" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1329,21 +1407,21 @@ version = "0.1.2" [[deps.PooledArrays]] deps = ["DataAPI", "Future"] -git-tree-sha1 = "db3a23166af8aebf4db5ef87ac5b00d36eb771e2" +git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "1.4.0" +version = "1.4.2" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" +deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff", "ReverseDiff"] +git-tree-sha1 = "5c076a409ec8d2a86d3685a7e4fed330cd489889" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.3" +version = "0.4.2" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" +git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.3" +version = "1.3.0" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] @@ -1357,9 +1435,9 @@ uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" [[deps.ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" +git-tree-sha1 = "d7a7aef8f8f2d537104f170139553b14dfe39fe9" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.7.1" +version = "1.7.2" [[deps.QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1383,9 +1461,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Ratios]] deps = ["Requires"] -git-tree-sha1 = "01d341f502250e81f6fec0afe662aa861392a3aa" +git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.2" +version = "0.4.3" [[deps.RecipesBase]] git-tree-sha1 = "6bf3f380ff52ce0832ddd3a2a7b9538ed1bcca7d" @@ -1393,16 +1471,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "3004608dc42101a944e44c1c68b599fa7c669080" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.24.1" +version = "2.32.0" [[deps.RecursiveFactorization]] -deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" +deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] +git-tree-sha1 = "0a2dfb3358fcde3676beb75405e782faa8c9aded" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.9" +version = "0.2.12" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1411,9 +1489,9 @@ version = "1.2.2" [[deps.RelocatableFolders]] deps = ["SHA", "Scratch"] -git-tree-sha1 = "cdbd3b1338c72ce29d9584fdbe9e9b70eeb5adca" +git-tree-sha1 = "22c5201127d7b243b9ee1de3b43c408879dff60f" uuid = "05181044-ff0b-4ac5-8273-598c1e38db00" -version = "0.1.3" +version = "0.3.0" [[deps.Requires]] deps = ["UUIDs"] @@ -1421,6 +1499,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" +[[deps.ReverseDiff]] +deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] +git-tree-sha1 = "b8e2eb3d8e1530acb73d8949eab3cedb1d43f840" +uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" +version = "1.14.1" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "bf3188feca147ce108c76ad82c2792c57abe7b1f" @@ -1437,15 +1521,15 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" +git-tree-sha1 = "7dbc15af7ed5f751a82bf3ed37757adf76c32402" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.4.0" +version = "3.4.1" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "62c2da6eb66de8bb88081d20528647140d4daa0e" +git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.0" +version = "0.1.1" [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" @@ -1454,42 +1538,42 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "1410aad1c6b35862573c01b96cd1f6dbe3979994" +git-tree-sha1 = "2ba4fee025f25d6711487b73e1ac177cbd127913" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.28" +version = "0.6.35" [[deps.ScanByte]] deps = ["Libdl", "SIMD"] -git-tree-sha1 = "9cc2955f2a254b18be655a4ee70bc4031b2b189e" +git-tree-sha1 = "2436b15f376005e8790e318329560dcc67188e84" uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb" -version = "0.3.0" +version = "0.3.3" [[deps.SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "adbb628d4116d9d87e41b6d678772c44877d442c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.26.1" +version = "1.52.0" [[deps.Scratch]] deps = ["Dates"] -git-tree-sha1 = "0b4b7f1393cff97c33891da2a0bf69c6ed241fda" +git-tree-sha1 = "f94f779c94e58bf9ea243e77a37e16d9de9126bd" uuid = "6c6a2e73-6563-6170-7368-637461726353" -version = "1.1.0" +version = "1.1.1" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" +git-tree-sha1 = "db8481cf5d6278a121184809e9eb1628943c7704" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.11" +version = "1.3.13" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "0afd9e6c623e379f593da01f20590bacc26d1d14" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.1" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1519,6 +1603,11 @@ git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" version = "0.1.2" +[[deps.SnoopPrecompile]] +git-tree-sha1 = "f604441450a3c0569830946e5b33b78c928e1a85" +uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" +version = "1.0.1" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1533,16 +1622,16 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] -deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] +git-tree-sha1 = "5fb8ba9180f467885e87a2c99cae178b67934be1" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.20.0" +version = "1.26.2" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" +git-tree-sha1 = "d75bda01f8c31ebb72df80a46c88b25d1c79c56d" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.1.0" +version = "2.1.7" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1552,48 +1641,54 @@ version = "0.1.1" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f94f9d627ba3f91e41a815b9f9f977d729e2e06f" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.7.6" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" +deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "dfec37b90740e3b9aa5dc2613892a3fc155c3b42" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.3.3" +version = "1.5.6" + +[[deps.StaticArraysCore]] +git-tree-sha1 = "ec2bd695e905a3c755b33026954b119ea17f2d22" +uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" +version = "1.3.0" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" +deps = ["LinearAlgebra"] +git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.2.0" +version = "1.5.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" +git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.14" +version = "0.33.21" [[deps.StatsFuns]] -deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" +deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] +git-tree-sha1 = "5783b877201a82fc0014cbf381e7e6eb130473a4" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.15" +version = "1.0.1" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "12cf3253ebd8e2a3214ae171fbfe51e7e8d8ad28" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] +git-tree-sha1 = "ac730bd978bf35f9fe45daa0bd1f51e493e97eb4" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.2.9" +version = "0.3.15" [[deps.StructArrays]] -deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" +deps = ["Adapt", "DataAPI", "StaticArraysCore", "Tables"] +git-tree-sha1 = "8c6ac65ec9ab781af05b08ff305ddc727c25f680" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.4" +version = "0.6.12" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -1614,10 +1709,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] -git-tree-sha1 = "bb1064c9a84c52e277f1096cf41434b675cd368b" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] +git-tree-sha1 = "5ce79ce186cc678bbb5c5681ca3379d1ddae11a1" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.6.1" +version = "1.7.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1635,33 +1730,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" +git-tree-sha1 = "f8629df51cab659d70d2e5618a430b4d3f37f2c3" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.7" +version = "0.5.0" [[deps.TiffImages]] -deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] +git-tree-sha1 = "70e6d2da9210371c927176cb7a56d41ef1260db7" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.3" +version = "0.6.1" [[deps.TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "216b95ea110b5972db65aa90f88d8d89dcb8851c" +git-tree-sha1 = "8a75929dcd3c38611db2f8d08546decb514fcadf" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.6" - -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" +version = "0.9.9" [[deps.TriangularSolve]] -deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" +deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"] +git-tree-sha1 = "8987cf4a0f8d6c375e4ab1438a048e0a185151e4" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.9" +version = "0.1.13" + +[[deps.Tricks]] +git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.6" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1683,15 +1777,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" +git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.10.1" +version = "1.11.0" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] +git-tree-sha1 = "05be19531ae910fb482db2d4c45e1aa1cde50560" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.24" +version = "0.21.47" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1701,9 +1795,9 @@ version = "0.2.0" [[deps.WeakRefStrings]] deps = ["DataAPI", "InlineStrings", "Parsers"] -git-tree-sha1 = "c69f9da3ff2f4f02e811c3323c22e5dfcb584cfa" +git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23" uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" -version = "1.4.1" +version = "1.4.2" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1713,9 +1807,9 @@ version = "0.5.5" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a" +git-tree-sha1 = "58443b63fb7e465a8a7210828c91c08b92132dff" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.12+0" +version = "2.9.14+0" [[deps.XSLT_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"] @@ -1782,10 +1876,16 @@ uuid = "700de1a5-db45-46bc-99cf-38207098b444" version = "0.2.2" [[deps.isoband_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "a1ac99674715995a536bbce674b068ec1b7d893d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c" uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" -version = "0.2.2+0" +version = "0.2.3+0" + +[[deps.libaom_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" +uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" +version = "3.4.0+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] @@ -1847,7 +1947,7 @@ version = "3.5.0+0" # ╟─0fea38f6-2c9e-43c6-bfc1-267ff220a0cc # ╟─aadd082a-3ed9-41b7-ba5e-7c5f77d59508 # ╟─011c89a7-f3d1-4cea-b71a-3d6f96a1801c -# ╠═2200503c-605c-4dfd-878f-ffea2431f7ba +# ╟─2200503c-605c-4dfd-878f-ffea2431f7ba # ╟─bde49eaf-3747-4edf-b712-3ee6f08ffe20 # ╠═c60a48e0-6f51-44b0-bd6e-332e04d2d332 # ╟─45762eb1-7404-4524-8d1d-788a70f8f5ef diff --git a/examples/worldwide/global_ocean_circulation.jl b/examples/worldwide/global_ocean_circulation.jl index 819ffb45..14d04e75 100644 --- a/examples/worldwide/global_ocean_circulation.jl +++ b/examples/worldwide/global_ocean_circulation.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.7 +# v0.19.11 using Markdown using InteractiveUtils @@ -379,7 +379,7 @@ end begin ✔1 [step!(𝐼) for y=1:ny, m=1:nm] - add_lonlat!(𝐼.🔴,𝐼.𝐷.XC,𝐼.𝐷.YC) + add_lonlat!(𝐼.🔴,𝐼.𝐷.XC,𝐼.𝐷.YC,𝑃.update_location!) ✔2="done" end @@ -457,18 +457,18 @@ PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [compat] -IndividualDisplacements = "~0.3.8" +IndividualDisplacements = "~0.3.9" MITgcmTools = "~0.2.1" -OceanStateEstimation = "~0.2.0" -Plots = "~1.25.7" -PlutoUI = "~0.7.32" +OceanStateEstimation = "~0.2.9" +Plots = "~1.31.7" +PlutoUI = "~0.7.39" """ # ╔═╡ 00000000-0000-0000-0000-000000000002 PLUTO_MANIFEST_TOML_CONTENTS = """ # This file is machine-generated - editing it directly is not advised -julia_version = "1.7.0" +julia_version = "1.7.2" manifest_format = "2.0" [[deps.AWS]] @@ -485,9 +485,9 @@ version = "1.1.4" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" +git-tree-sha1 = "195c5505521008abea5aee4f96930717958eac6f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.3" +version = "3.4.0" [[deps.ArgTools]] uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" @@ -499,10 +499,40 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"] +git-tree-sha1 = "0582b5976fc76523f77056e888e454f0f7732596" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "6.0.22" + +[[deps.ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "40debc9f72d0511e12d817c7ca06a721b6423ba3" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.17" + +[[deps.ArrayInterfaceGPUArrays]] +deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] +git-tree-sha1 = "febba7add2873aecc0b6620b55969e73ec875bce" +uuid = "6ba088a2-8465-4c0a-af30-387133b534db" +version = "0.2.1" + +[[deps.ArrayInterfaceOffsetArrays]] +deps = ["ArrayInterface", "OffsetArrays", "Static"] +git-tree-sha1 = "c49f6bad95a30defff7c637731f00934c7289c50" +uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826" +version = "0.1.6" + +[[deps.ArrayInterfaceStaticArrays]] +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] +git-tree-sha1 = "efb000a9f643f018d5154e56814e338b5746c560" +uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" +version = "0.1.4" + +[[deps.ArrayInterfaceStaticArraysCore]] +deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "a1e2cf6ced6505cbad2490532388683f1e88c3ed" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.0" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -512,15 +542,15 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" +git-tree-sha1 = "eaee37f76339077f86679787a71990c4e465477f" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.2" +version = "0.1.4" [[deps.Blosc]] deps = ["Blosc_jll"] -git-tree-sha1 = "575bdd70552dd9a7eaeba08ef2533226cdc50779" +git-tree-sha1 = "310b77648d38c223d947ff3f50f511d08690b8d5" uuid = "a74b3585-a348-5f62-a45c-50e91977d574" -version = "0.7.2" +version = "0.7.3" [[deps.Blosc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Pkg", "Zlib_jll", "Zstd_jll"] @@ -536,21 +566,21 @@ version = "1.0.8+0" [[deps.CFTime]] deps = ["Dates", "Printf"] -git-tree-sha1 = "bca6cb6ee746e6485ca4535f6cc29cf3579a0f20" +git-tree-sha1 = "ed2e76c1c3c43fd9d0cb9248674620b29d71f2d1" uuid = "179af706-886a-5703-950a-314cd64e0468" -version = "0.1.1" +version = "0.1.2" [[deps.CPUSummary]] -deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" +deps = ["CpuId", "IfElse", "Static"] +git-tree-sha1 = "8a43595f7b3f7d6dd1e07ad9b94081e1975df4af" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.7" +version = "0.1.25" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "49f14b6c56a2da47608fe30aed711b5882264d7a" +git-tree-sha1 = "873fb188a4b9d76549b81465b1f75c82aaf59238" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.9.11" +version = "0.10.4" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -558,6 +588,12 @@ git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" version = "1.16.1+1" +[[deps.Calculus]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" +uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" +version = "0.5.1" + [[deps.CatViews]] deps = ["Random", "Test"] git-tree-sha1 = "23d1f1e10d4e24374112fcf800ac981d14a54b24" @@ -566,27 +602,27 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" +git-tree-sha1 = "80ca332f6dcb2508adba68f22f551adb2d00a624" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.12.0" +version = "1.15.3" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1" +git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.2" +version = "0.1.4" [[deps.ClimateModels]] -deps = ["AWS", "CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"] -git-tree-sha1 = "7e9ebc6da08f73d6fc16e7805245ec03b7efc3fd" +deps = ["CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"] +git-tree-sha1 = "26c2a0ba4f7d3542177943181e7b61722daa3c2a" uuid = "f6adb021-9183-4f40-84dc-8cea6f651bb0" -version = "0.2.2" +version = "0.2.10" [[deps.CloseOpenIntervals]] deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "7b8f09d58294dc8aa13d91a8544b37c8a1dcbc06" +git-tree-sha1 = "5522c338564580adf5d58d91e43a55db0fa5fb39" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.4" +version = "0.1.10" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -595,16 +631,22 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.0" [[deps.ColorSchemes]] -deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random"] +git-tree-sha1 = "1fd869cc3875b57347f7027521f561cf46d1fcd8" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.16.0" +version = "3.19.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] -git-tree-sha1 = "024fe24d83e4a5bf5fc80501a314ce0d1aa35597" +git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" -version = "0.11.0" +version = "0.11.4" + +[[deps.ColorVectorSpace]] +deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] +git-tree-sha1 = "d08c20eef1f2cbc6e60fd3612ac4340b89fea322" +uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" +version = "0.9.9" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -613,9 +655,9 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.8" [[deps.CommonSolve]] -git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f" +git-tree-sha1 = "332a332c97c7071600984b3c31d9067e1a4e6e25" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.0" +version = "0.2.1" [[deps.CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -625,9 +667,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "44c37b4636bc54afac5c574d2d02b625349d6582" +git-tree-sha1 = "78bee250c6826e1cf805a88b7f1e86025275d208" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.41.0" +version = "3.46.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -635,15 +677,20 @@ uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f74e9d5388b8620b4cee35d4c5a618dd4dc547f4" +git-tree-sha1 = "fb21ddd70a051d882a1686a5a550990bbe371a95" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.3.0" +version = "1.4.1" [[deps.Contour]] -deps = ["StaticArrays"] -git-tree-sha1 = "9f02045d934dc030edad45944ea80dbd1f0ebea7" +git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.5.7" +version = "0.6.2" + +[[deps.CpuId]] +deps = ["Markdown"] +git-tree-sha1 = "fcbb72b032692610bfbdb15018ac16a36cf2e406" +uuid = "adafc99b-e345-5852-983c-f28acb93d879" +version = "0.3.1" [[deps.Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" @@ -655,28 +702,22 @@ git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" uuid = "6023044f-b3ef-4c22-8399-3ec90a0c9b75" version = "0.5.0" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "31186e61936fbbccb41d809ad4338c9f7addf7ae" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.0" - [[deps.DataAPI]] -git-tree-sha1 = "cc70b17275652eb47bc9e5f81635981f13cea5c8" +git-tree-sha1 = "fb5f5316dd3fd4c5e7c30a24d50643b73e37cd40" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.9.0" +version = "1.10.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" +git-tree-sha1 = "daa21eb85147f72e41f6352a57fccea377e310a9" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.2" +version = "1.3.4" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3daef5523dd2e769dad2365274f760ff5f282c7d" +git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.11" +version = "0.18.13" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -698,10 +739,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" +deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "665832fd81cd961aad28fa7009d4aaa23a07db57" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.81.3" +version = "6.98.2" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -711,14 +752,15 @@ version = "1.0.3" [[deps.DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" +git-tree-sha1 = "992a23afdb109d0d2f8802a30cf5ae4b1fe7ea68" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.1" +version = "1.11.1" [[deps.DiskArrays]] -git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" +deps = ["OffsetArrays"] +git-tree-sha1 = "230d999fc78652ea070312373ed1bfe2489e4fe5" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.3.0" +version = "0.3.6" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -732,20 +774,26 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" +git-tree-sha1 = "334a5896c1534bb1aa7aa2a642d30ba7707357ef" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.42" +version = "0.25.68" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "5158c2b41018c5f7eb1470d558127ac274eca0c9" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.1" [[deps.Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" +[[deps.DualNumbers]] +deps = ["Calculus", "NaNMath", "SpecialFunctions"] +git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" +uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" +version = "0.6.8" + [[deps.EarCut_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3f3a2501fa7236e9b911e0f7a588c657e822bb6d" @@ -754,21 +802,26 @@ version = "2.2.3+0" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "b3bfd02e98aedfa5cf885665493c5598c350cd2f" +git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.2.10+0" +version = "2.4.8+0" [[deps.ExponentialUtilities]] -deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" +deps = ["ArrayInterfaceCore", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "b40c9037e1a33990466bc5d224ced34b34eebdb0" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.11.0" +version = "1.18.0" [[deps.ExprTools]] git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.8" +[[deps.Extents]] +git-tree-sha1 = "5e1e4c53fa39afe63a7d356e30452249365fba99" +uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" +version = "0.1.1" + [[deps.EzXML]] deps = ["Printf", "XML2_jll"] git-tree-sha1 = "0fa3b52a04a4e210aeb1626def9c90df3ae65268" @@ -782,39 +835,51 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "d8a578692e3077ac998b50c0217dfd67f21d1e5f" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "ccd479984c7838684b3ac204b716c89955c76623" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.0+0" +version = "4.4.2+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" +deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] +git-tree-sha1 = "21cdeff41e5a1822c2acd7fc7934c5f450588e00" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.12" +version = "0.2.1" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "cfd9d0dbb947181644c00bd7e988b4bb30a5b2a5" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.6" + +[[deps.FileIO]] +deps = ["Pkg", "Requires", "UUIDs"] +git-tree-sha1 = "94f5101b96d2d968ace56f7f2db19d0a5f592e28" +uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" +version = "1.15.0" + [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] -git-tree-sha1 = "04d13bfa8ef11720c24e4d840c0033d145537df7" +git-tree-sha1 = "316daa94fad0b7a008ebd573e002efd6609d85ac" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" -version = "0.9.17" +version = "0.9.19" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "8756f9935b7ccc9064c6eef0bff0ad643df733a3" +git-tree-sha1 = "246621d23d1f43e3b9c368bf3b72b2331a27c286" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.7" +version = "0.13.2" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" +deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "5a2cff9b6b77b33b89f3d97a4d367747adce647e" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.10.0" +version = "2.15.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -841,9 +906,9 @@ version = "0.6.0" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" +git-tree-sha1 = "187198a4ed8ccd7b5d99c41b69c679269ea2b2d4" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.25" +version = "0.10.32" [[deps.FreeType2_jll]] deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] @@ -862,33 +927,57 @@ git-tree-sha1 = "241552bc2209f0fa068b6415b1942cc0aa486bcc" uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" version = "1.1.2" +[[deps.FunctionWrappersWrappers]] +deps = ["FunctionWrappers"] +git-tree-sha1 = "a5e6e7f12607e90d71b09e6ce2c965e41b337968" +uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" +version = "0.1.1" + [[deps.Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[deps.GLFW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libglvnd_jll", "Pkg", "Xorg_libXcursor_jll", "Xorg_libXi_jll", "Xorg_libXinerama_jll", "Xorg_libXrandr_jll"] -git-tree-sha1 = "0c603255764a1fa0b61752d2bec14cfbd18f7fe8" +git-tree-sha1 = "d972031d28c8c8d9d7b41a536ad7bb0c2579caca" uuid = "0656b61e-2033-5cc2-a64a-77c0f6c09b89" -version = "3.3.5+1" +version = "3.3.8+0" + +[[deps.GPUArraysCore]] +deps = ["Adapt"] +git-tree-sha1 = "6872f5ec8fd1a38880f027a26739d42dcda6691f" +uuid = "46192b85-c4d5-4398-a991-12ede77f4527" +version = "0.1.2" [[deps.GR]] deps = ["Base64", "DelimitedFiles", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Printf", "Random", "RelocatableFolders", "Serialization", "Sockets", "Test", "UUIDs"] -git-tree-sha1 = "4a740db447aae0fbeb3ee730de1afbb14ac798a1" +git-tree-sha1 = "cf0a9940f250dc3cb6cc6c6821b4bf8a4286cf9c" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.63.1" +version = "0.66.2" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Pkg", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "aa22e1ee9e722f1da183eb33370df4c1aeb6c2cd" +git-tree-sha1 = "2d908286d120c584abbe7621756c341707096ba4" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.63.1+0" +version = "0.66.2+0" + +[[deps.GenericSchur]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "fb69b2a645fa69ba5f474af09221b9308b160ce6" +uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" +version = "0.5.3" + +[[deps.GeoInterface]] +deps = ["Extents"] +git-tree-sha1 = "fb28b5dc239d0174d7297310ef7b84a11804dfab" +uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" +version = "1.0.1" [[deps.GeometryBasics]] -deps = ["EarCut_jll", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "58bcdf5ebc057b085e58d95c138725628dd7453c" +deps = ["EarCut_jll", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "a7a97895780dab1085a97769316aa348830dc991" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.1" +version = "0.4.3" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -904,9 +993,9 @@ version = "1.2.1" [[deps.GitHub]] deps = ["Base64", "Dates", "HTTP", "JSON", "MbedTLS", "Sockets", "SodiumSeal", "URIs"] -git-tree-sha1 = "056781ae7b953289778408b136f8708a46837979" +git-tree-sha1 = "f1d3170f588c7610b568c9a97971915100dd51e8" uuid = "bc5e4493-9b4d-5f90-b8aa-2b2bcaad7a26" -version = "5.7.2" +version = "5.7.3" [[deps.Git_jll]] deps = ["Artifacts", "Expat_jll", "Gettext_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Pkg", "Zlib_jll"] @@ -928,9 +1017,9 @@ version = "1.3.14+0" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" +git-tree-sha1 = "a6d30bdc378d340912f48abf01281aab68c0dec8" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.5.1" +version = "1.7.2" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -939,9 +1028,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" +git-tree-sha1 = "c003b31e2e818bc512b0ff99d7dce03b0c1359f5" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.1+0" +version = "1.12.2+1" [[deps.HTTP]] deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"] @@ -957,21 +1046,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" +git-tree-sha1 = "b7b88a4716ac33fe31d6556c02fc60017594343c" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.6" +version = "0.1.8" -[[deps.Hwloc]] -deps = ["Hwloc_jll"] -git-tree-sha1 = "92d99146066c5c6888d5a3abc871e6a214388b91" -uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" -version = "2.0.0" - -[[deps.Hwloc_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" -uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.7.0+0" +[[deps.HypergeometricFunctions]] +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] +git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" +version = "0.3.11" [[deps.Hyperscript]] deps = ["Test"] @@ -980,9 +1063,10 @@ uuid = "47d2ed2b-36de-50cf-bf87-49c2cf4b8b91" version = "0.0.4" [[deps.HypertextLiteral]] -git-tree-sha1 = "2b078b5a615c6c0396c77810d92ee8c6f470d238" +deps = ["Tricks"] +git-tree-sha1 = "c47c5fa4c5308f27ccaac35504858d8914e102f9" uuid = "ac1192a8-f4b3-4bfe-ba22-af5b92cd3ab2" -version = "0.9.3" +version = "0.9.4" [[deps.IOCapture]] deps = ["Logging", "Random"] @@ -997,26 +1081,25 @@ version = "0.1.1" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" +git-tree-sha1 = "025aa6e551a577d2ce282054502a16347c17b7f5" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.8" +version = "0.3.9" [[deps.Inflate]] -git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" +git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" -version = "0.1.2" +version = "0.1.3" [[deps.IniFile]] -deps = ["Test"] -git-tree-sha1 = "098e4d2c533924c921f9f9847274f2ad89e018b8" +git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.0" +version = "0.5.1" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" +git-tree-sha1 = "d19f9edd8c34760dca2de2b503f969d8700ed288" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.2" +version = "1.1.4" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1024,9 +1107,9 @@ uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "a7254c0acd8e62f1ac75ad24d5db43f5f19f3c65" +git-tree-sha1 = "b3364212fb5d870f724876ffcd34dd8ec6d98918" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.2" +version = "0.1.7" [[deps.InvertedIndices]] git-tree-sha1 = "bee5f1ef5bf65df56bdd2e40447590b272a5471f" @@ -1054,41 +1137,47 @@ git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" uuid = "82899510-4779-5014-852e-03e436cf321d" version = "1.0.0" +[[deps.JLD2]] +deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "TranscodingStreams", "UUIDs"] +git-tree-sha1 = "81b9477b49402b47fbe7f7ae0b252077f53e4a08" +uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" +version = "0.4.22" + [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" +git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.4.0" +version = "1.4.1" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" +git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.2" +version = "0.21.3" [[deps.JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d735490ac75c5cb9f1b00d8b5509c11984dc6943" +git-tree-sha1 = "b53380851c6e6664204efb2e62cd24fa5c47e4ba" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" -version = "2.1.0+0" +version = "2.1.2+0" [[deps.KLU]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] -git-tree-sha1 = "1ed18ccf6292d89abf85beba35b9399aeddff9b2" +git-tree-sha1 = "cae5e3dfd89b209e01bcd65b3a25e74462c67ee0" uuid = "ef3ab10e-7fda-4108-b977-705223b18434" -version = "0.2.3" +version = "0.3.0" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +git-tree-sha1 = "a2327039e1c84615e22d662adb3df113caf44b70" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.7.11" +version = "0.8.3" [[deps.KrylovKit]] deps = ["LinearAlgebra", "Printf"] -git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +git-tree-sha1 = "49b0c1dd5c292870577b8f58c51072bd558febb9" uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" -version = "0.5.3" +version = "0.5.4" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1096,6 +1185,12 @@ git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c" uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d" version = "3.100.1+0" +[[deps.LERC_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" +uuid = "88015f11-f218-50d7-93a8-a6af411a945d" +version = "3.0.0+1" + [[deps.LRUCache]] git-tree-sha1 = "d64a0aff6691612ab9fb0117b0995270871c5dfc" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" @@ -1112,23 +1207,17 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" -uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.7.0" - [[deps.Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "Printf", "Requires"] -git-tree-sha1 = "a8f4f279b6fa3c3c4f1adadd78a621b13a506bce" +git-tree-sha1 = "1a43be956d433b5d0321197150c2f94e16c0aaa0" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.9" +version = "0.15.16" [[deps.LayoutPointers]] -deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" +deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] +git-tree-sha1 = "b67e749fb35530979839e7b4b606a97105fe4f1c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.5" +version = "0.1.10" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -1190,10 +1279,10 @@ uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9" version = "2.35.0+0" [[deps.Libtiff_jll]] -deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] -git-tree-sha1 = "340e257aada13f95f98ee352d316c3bed37c8ab9" +deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] +git-tree-sha1 = "3eb79b0ca5764d4799c06699573fd8f533259713" uuid = "89763e89-9b03-5906-acba-b20f662cd828" -version = "4.3.0+0" +version = "4.4.0+0" [[deps.Libuuid_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1203,34 +1292,34 @@ version = "2.36.0+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "f27132e551e959b3667d8c93eae90973225032dd" +git-tree-sha1 = "7bbea35cec17305fc70a0e5b4641477dc0789d9d" uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.1.1" +version = "7.2.0" [[deps.LinearAlgebra]] deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] -git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "af8c2f07401cb3c39ad05542adf053314ea37ec8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.11.1" +version = "1.25.0" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" +git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.6" +version = "0.3.18" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" +deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "60613258cc56b6c7c909f3e960e8b3b4e86dc2f2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.101" +version = "0.12.124" [[deps.Lz4_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1251,19 +1340,19 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.ManualMemory]] -git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" +git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" -version = "0.1.6" +version = "0.1.8" [[deps.Markdown]] deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[deps.MbedTLS]] -deps = ["Dates", "MbedTLS_jll", "Random", "Sockets"] -git-tree-sha1 = "1c38e51c3d08ef2278062ebceade0e46cefc96fe" +deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "Random", "Sockets"] +git-tree-sha1 = "2f0be365951a88dfb084f754005177e6dfb00ed0" uuid = "739be429-bea8-5141-9913-cc70e7f3736d" -version = "1.0.3" +version = "1.1.4" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] @@ -1303,6 +1392,12 @@ git-tree-sha1 = "c6190f9a7fc5d9d5915ab29f2134421b12d24a68" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.2" +[[deps.NCDatasets]] +deps = ["CFTime", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] +git-tree-sha1 = "16463e1587495780aa05e05440f16959042bfcb1" +uuid = "85f8d34a-cbdd-5861-8df4-14fed0d494ab" +version = "0.12.7" + [[deps.NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] git-tree-sha1 = "50310f934e55e5ca3912fb941dec199b49ca9b68" @@ -1316,48 +1411,49 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" +deps = ["OpenLibm_jll"] +git-tree-sha1 = "a7c3d1da1189a1c2fe843a3bfa04d18d20eb3211" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.7" +version = "1.0.1" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] -git-tree-sha1 = "16baacfdc8758bc374882566c9187e785e85c2f0" +git-tree-sha1 = "0e353ed734b1747fc20cd4cba0edd9ac027eff6a" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.9" +version = "0.4.11" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" +git-tree-sha1 = "328178762645783b20495d408ab317b4c2d25b1a" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.4" +version = "0.11.7" [[deps.NetCDF_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.802.101+0" +version = "400.902.5+1" [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] -deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" +deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] +git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.14" +version = "0.3.22" [[deps.OceanStateEstimation]] -deps = ["Artifacts", "CodecZlib", "Downloads", "FortranFiles", "LazyArtifacts", "MITgcmTools", "MeshArrays", "Statistics", "Tar"] -git-tree-sha1 = "6f52efdb2a7a921bb4912e544af574bb07523f0a" +deps = ["Artifacts", "CodecZlib", "Distributed", "Downloads", "FortranFiles", "JLD2", "LazyArtifacts", "MITgcmTools", "MeshArrays", "NCDatasets", "Pkg", "Printf", "SharedArrays", "Statistics", "TOML", "Tar"] +git-tree-sha1 = "bbe8f5ab284cbe0facb7a29b0fa1e636835a1d4f" uuid = "891f6deb-a4f5-4bc5-a2e3-1e8f649cdd2c" -version = "0.2.0" +version = "0.2.9" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "043017e0bdeff61cfbb7afeb558ab29536bbb5ed" +git-tree-sha1 = "1ea784113a6aa054c5ebd95945fa5e52c2f378e7" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.10.8" +version = "1.12.7" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1375,9 +1471,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" +git-tree-sha1 = "e60321e3f2616584ff98f0a4f18d98ae6f89bbb3" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.13+0" +version = "1.1.17+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1397,10 +1493,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "4cf346be836dcafdfa8359fc0f593ad5860ba7cf" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.6.5" +version = "6.24.4" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1414,9 +1510,9 @@ version = "8.44.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "ee26b350276c51697c9c2d88a072b339f9f03d73" +git-tree-sha1 = "cf494dca75a69712a72b80bc48f59dcf3dea63ec" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.5" +version = "0.11.16" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1426,9 +1522,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" +git-tree-sha1 = "3d5bf43e3e8b412656404ed9466f1dcbf7c50269" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.2.1" +version = "2.4.0" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1441,58 +1537,58 @@ deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markd uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" [[deps.PlotThemes]] -deps = ["PlotUtils", "Requires", "Statistics"] -git-tree-sha1 = "a3a964ce9dc7898193536002a6dd892b1b5a6f1d" +deps = ["PlotUtils", "Statistics"] +git-tree-sha1 = "8162b2f8547bc23876edd0c5181b27702ae58dce" uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" -version = "2.0.1" +version = "3.0.0" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" +git-tree-sha1 = "9888e59493658e476d3073f1ce24348bdc086660" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.3" +version = "1.3.0" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "GeometryBasics", "JSON", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "7e4920a7d4323b8ffc3db184580598450bde8a8e" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "GeometryBasics", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] +git-tree-sha1 = "a19652399f43938413340b2068e11e55caa46b65" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.25.7" +version = "1.31.7" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] -git-tree-sha1 = "ae6145ca68947569058866e443df69587acc1806" +git-tree-sha1 = "8d1f54886b9037091edf146b517989fc4a09efec" uuid = "7f904dfe-b85e-4ff6-b463-dae2292396a8" -version = "0.7.32" +version = "0.7.39" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" +git-tree-sha1 = "94e20822bd7427b1b1b843a3980003f5d5e8696b" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.3" +version = "0.6.14" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" +git-tree-sha1 = "233feae14c07cca6b95080f77a7d332612603f6a" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.3" +version = "0.1.9" [[deps.PooledArrays]] deps = ["DataAPI", "Future"] -git-tree-sha1 = "db3a23166af8aebf4db5ef87ac5b00d36eb771e2" +git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "1.4.0" +version = "1.4.2" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" +deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff", "ReverseDiff"] +git-tree-sha1 = "5c076a409ec8d2a86d3685a7e4fed330cd489889" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.3" +version = "0.4.2" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" +git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.3" +version = "1.3.0" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] @@ -1506,9 +1602,9 @@ uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" [[deps.Qt5Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "xkbcommon_jll"] -git-tree-sha1 = "ad368663a5e20dbb8d6dc2fddeefe4dae0781ae8" +git-tree-sha1 = "c6c0f690d0cc7caddb74cef7aa847b824a16b256" uuid = "ea2cea3b-5b76-57ae-a6ef-0a8af62496e1" -version = "5.15.3+0" +version = "5.15.3+1" [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] @@ -1531,21 +1627,21 @@ version = "1.2.1" [[deps.RecipesPipeline]] deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase"] -git-tree-sha1 = "37c1631cb3cc36a535105e6d5557864c82cd8c2b" +git-tree-sha1 = "e7eac76a958f8664f2718508435d058168c7953d" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.5.0" +version = "0.6.3" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "3004608dc42101a944e44c1c68b599fa7c669080" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.24.1" +version = "2.32.0" [[deps.RecursiveFactorization]] -deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" +deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] +git-tree-sha1 = "0a2dfb3358fcde3676beb75405e782faa8c9aded" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.9" +version = "0.2.12" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1554,9 +1650,9 @@ version = "1.2.2" [[deps.RelocatableFolders]] deps = ["SHA", "Scratch"] -git-tree-sha1 = "cdbd3b1338c72ce29d9584fdbe9e9b70eeb5adca" +git-tree-sha1 = "22c5201127d7b243b9ee1de3b43c408879dff60f" uuid = "05181044-ff0b-4ac5-8273-598c1e38db00" -version = "0.1.3" +version = "0.3.0" [[deps.Requires]] deps = ["UUIDs"] @@ -1569,6 +1665,12 @@ git-tree-sha1 = "41ac127cd281bb33e42aba46a9d3b25cd35fc6d5" uuid = "20febd7b-183b-5ae2-ac4a-720e7ce64774" version = "0.4.1" +[[deps.ReverseDiff]] +deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] +git-tree-sha1 = "b8e2eb3d8e1530acb73d8949eab3cedb1d43f840" +uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" +version = "1.14.1" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "bf3188feca147ce108c76ad82c2792c57abe7b1f" @@ -1586,9 +1688,9 @@ uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "62c2da6eb66de8bb88081d20528647140d4daa0e" +git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.0" +version = "0.1.1" [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" @@ -1597,36 +1699,36 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "1410aad1c6b35862573c01b96cd1f6dbe3979994" +git-tree-sha1 = "2ba4fee025f25d6711487b73e1ac177cbd127913" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.28" +version = "0.6.35" [[deps.SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "adbb628d4116d9d87e41b6d678772c44877d442c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.26.1" +version = "1.52.0" [[deps.Scratch]] deps = ["Dates"] -git-tree-sha1 = "0b4b7f1393cff97c33891da2a0bf69c6ed241fda" +git-tree-sha1 = "f94f779c94e58bf9ea243e77a37e16d9de9126bd" uuid = "6c6a2e73-6563-6170-7368-637461726353" -version = "1.1.0" +version = "1.1.1" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" +git-tree-sha1 = "db8481cf5d6278a121184809e9eb1628943c7704" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.11" +version = "1.3.13" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "0afd9e6c623e379f593da01f20590bacc26d1d14" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.1" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1644,6 +1746,11 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.SnoopPrecompile]] +git-tree-sha1 = "f604441450a3c0569830946e5b33b78c928e1a85" +uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" +version = "1.0.1" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1664,61 +1771,67 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] -deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] +git-tree-sha1 = "5fb8ba9180f467885e87a2c99cae178b67934be1" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.20.0" +version = "1.26.2" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" +git-tree-sha1 = "d75bda01f8c31ebb72df80a46c88b25d1c79c56d" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.1.0" +version = "2.1.7" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f94f9d627ba3f91e41a815b9f9f977d729e2e06f" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.7.6" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" +deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "dfec37b90740e3b9aa5dc2613892a3fc155c3b42" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.3.3" +version = "1.5.6" + +[[deps.StaticArraysCore]] +git-tree-sha1 = "ec2bd695e905a3c755b33026954b119ea17f2d22" +uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" +version = "1.3.0" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" +deps = ["LinearAlgebra"] +git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.2.0" +version = "1.5.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" +git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.14" +version = "0.33.21" [[deps.StatsFuns]] -deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" +deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] +git-tree-sha1 = "5783b877201a82fc0014cbf381e7e6eb130473a4" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.15" +version = "1.0.1" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "12cf3253ebd8e2a3214ae171fbfe51e7e8d8ad28" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] +git-tree-sha1 = "ac730bd978bf35f9fe45daa0bd1f51e493e97eb4" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.2.9" +version = "0.3.15" [[deps.StructArrays]] -deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" +deps = ["Adapt", "DataAPI", "StaticArraysCore", "Tables"] +git-tree-sha1 = "8c6ac65ec9ab781af05b08ff305ddc727c25f680" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.4" +version = "0.6.12" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -1729,9 +1842,9 @@ deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" [[deps.Suppressor]] -git-tree-sha1 = "a819d77f31f83e5792a76081eee1ea6342ab8787" +git-tree-sha1 = "c6ed566db2fe3931292865b966d6d140b7ef32a9" uuid = "fd094767-a336-5f1f-9728-57cf17d0bbfb" -version = "0.2.0" +version = "0.2.1" [[deps.TOML]] deps = ["Dates"] @@ -1744,47 +1857,52 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] -git-tree-sha1 = "bb1064c9a84c52e277f1096cf41434b675cd368b" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] +git-tree-sha1 = "5ce79ce186cc678bbb5c5681ca3379d1ddae11a1" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.6.1" +version = "1.7.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" +[[deps.TensorCore]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "1feb45f88d133a655e001435632f019a9a1bcdb6" +uuid = "62fd8b95-f654-4bbd-a8a5-9c27f68ccd50" +version = "0.1.1" + [[deps.Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" +git-tree-sha1 = "f8629df51cab659d70d2e5618a430b4d3f37f2c3" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.7" +version = "0.5.0" [[deps.TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "216b95ea110b5972db65aa90f88d8d89dcb8851c" +git-tree-sha1 = "8a75929dcd3c38611db2f8d08546decb514fcadf" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.6" - -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" +version = "0.9.9" [[deps.TriangularSolve]] -deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" +deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"] +git-tree-sha1 = "8987cf4a0f8d6c375e4ab1438a048e0a185151e4" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.9" +version = "0.1.13" + +[[deps.Tricks]] +git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.6" [[deps.URIs]] -git-tree-sha1 = "97bbe755a53fe859669cd907f2d96aee8d2c1355" +git-tree-sha1 = "e59ecc5a41b000fa94423a578d29290c7266fc10" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" -version = "1.3.0" +version = "1.4.0" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1806,9 +1924,9 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" +git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.10.1" +version = "1.11.0" [[deps.Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" @@ -1816,10 +1934,10 @@ uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" version = "0.1.2" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] +git-tree-sha1 = "05be19531ae910fb482db2d4c45e1aa1cde50560" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.24" +version = "0.21.47" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1835,21 +1953,21 @@ version = "1.19.0+0" [[deps.Wayland_protocols_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "66d72dc6fcc86352f01676e8f0f698562e60510f" +git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da" uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91" -version = "1.23.0+0" +version = "1.25.0+0" [[deps.WeakRefStrings]] deps = ["DataAPI", "InlineStrings", "Parsers"] -git-tree-sha1 = "c69f9da3ff2f4f02e811c3323c22e5dfcb584cfa" +git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23" uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" -version = "1.4.1" +version = "1.4.2" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a" +git-tree-sha1 = "58443b63fb7e465a8a7210828c91c08b92132dff" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.12+0" +version = "2.9.14+0" [[deps.XMLDict]] deps = ["EzXML", "IterTools", "OrderedCollections"] @@ -1991,9 +2109,9 @@ version = "1.4.0+3" [[deps.Zarr]] deps = ["AWS", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "LRUCache", "OffsetArrays", "Pkg", "URIs"] -git-tree-sha1 = "47a53313f4493879345f217e20146c4c40774520" +git-tree-sha1 = "112e0085a58d5dc231864c98a5097ad1021d7466" uuid = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99" -version = "0.7.1" +version = "0.7.3" [[deps.Zlib_jll]] deps = ["Libdl"] @@ -2001,9 +2119,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "cc4bf3fdde8b7e3e9fa0351bdeedba1cf3b7f6e6" +git-tree-sha1 = "e45044cd873ded54b6a5bac0eb5c971392cf1927" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.0+0" +version = "1.5.2+0" [[deps.ZygoteRules]] deps = ["MacroTools"] @@ -2011,6 +2129,12 @@ git-tree-sha1 = "8c1a8e4dfacb1fd631745552c8db35d0deb09ea0" uuid = "700de1a5-db45-46bc-99cf-38207098b444" version = "0.2.2" +[[deps.libaom_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" +uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" +version = "3.4.0+0" + [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] git-tree-sha1 = "5982a94fcba20f02f42ace44b9894ee2b140fe47" @@ -2067,9 +2191,9 @@ version = "3.5.0+0" [[deps.xkbcommon_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] -git-tree-sha1 = "ece2350174195bb31de1a63bea3a41ae1aa593b6" +git-tree-sha1 = "9ebfc140cc56e8c2156a15ceac2f0302e327ac0a" uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" -version = "0.9.1+5" +version = "1.4.1+0" """ # ╔═╡ Cell order: diff --git a/examples/worldwide/three_dimensional_ocean.jl b/examples/worldwide/three_dimensional_ocean.jl index ab403109..42cf04a6 100644 --- a/examples/worldwide/three_dimensional_ocean.jl +++ b/examples/worldwide/three_dimensional_ocean.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.7 +# v0.19.11 using Markdown using InteractiveUtils @@ -164,7 +164,7 @@ function custom🔧(sol,𝑃::𝐹_MeshArray3D,𝐷::NamedTuple;id=missing,𝑇= df.year=df.t ./86400/365 #add depth (i.e. the 3rd, vertical, coordinate) - k=[sol[1,i,j][3] for i in 1:size(sol,2), j in 1:size(sol,3)] + k=[[sol[i][3,1] for i in 1:size(sol,3)];[sol[i][3,end] for i in 1:size(sol,3)]] nz=length(𝐷.RC) df.k=min.(max.(k[:],Ref(0.0)),Ref(nz)) #level k=Int.(floor.(df.k)); w=(df.k-k); @@ -230,6 +230,7 @@ function plot(𝐼::Individuals) return fig end + # ╔═╡ 00000000-0000-0000-0000-000000000001 PLUTO_PROJECT_TOML_CONTENTS = """ [deps] @@ -241,19 +242,19 @@ NetCDF = "30363a11-5582-574a-97bb-aa9a979735b9" OceanStateEstimation = "891f6deb-a4f5-4bc5-a2e3-1e8f649cdd2c" [compat] -CairoMakie = "~0.7.2" -DataFrames = "~1.3.2" -IndividualDisplacements = "~0.3.8" +CairoMakie = "~0.8.13" +DataFrames = "~1.3.4" +IndividualDisplacements = "~0.3.9" MeshArrays = "~0.2.31" -NetCDF = "~0.11.4" -OceanStateEstimation = "~0.2.0" +NetCDF = "~0.11.7" +OceanStateEstimation = "~0.2.9" """ # ╔═╡ 00000000-0000-0000-0000-000000000002 PLUTO_MANIFEST_TOML_CONTENTS = """ # This file is machine-generated - editing it directly is not advised -julia_version = "1.7.0" +julia_version = "1.7.2" manifest_format = "2.0" [[deps.AWS]] @@ -264,20 +265,20 @@ version = "1.61.0" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] -git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" +git-tree-sha1 = "69f7020bd72f069c219b5e8c236c1fa90d2cb409" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.1.0" +version = "1.2.1" [[deps.AbstractTrees]] -git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" +git-tree-sha1 = "5c0b629df8a5566a06f5fef5100b53ea56e465a0" uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" -version = "0.3.4" +version = "0.4.2" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" +git-tree-sha1 = "195c5505521008abea5aee4f96930717958eac6f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.3" +version = "3.4.0" [[deps.Animations]] deps = ["Colors"] @@ -295,10 +296,40 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" +deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "Static"] +git-tree-sha1 = "0582b5976fc76523f77056e888e454f0f7732596" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.2" +version = "6.0.22" + +[[deps.ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "40debc9f72d0511e12d817c7ca06a721b6423ba3" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.17" + +[[deps.ArrayInterfaceGPUArrays]] +deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] +git-tree-sha1 = "febba7add2873aecc0b6620b55969e73ec875bce" +uuid = "6ba088a2-8465-4c0a-af30-387133b534db" +version = "0.2.1" + +[[deps.ArrayInterfaceOffsetArrays]] +deps = ["ArrayInterface", "OffsetArrays", "Static"] +git-tree-sha1 = "c49f6bad95a30defff7c637731f00934c7289c50" +uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826" +version = "0.1.6" + +[[deps.ArrayInterfaceStaticArrays]] +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] +git-tree-sha1 = "efb000a9f643f018d5154e56814e338b5746c560" +uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" +version = "0.1.4" + +[[deps.ArrayInterfaceStaticArraysCore]] +deps = ["Adapt", "ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "a1e2cf6ced6505cbad2490532388683f1e88c3ed" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.0" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -320,15 +351,15 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" +git-tree-sha1 = "eaee37f76339077f86679787a71990c4e465477f" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.2" +version = "0.1.4" [[deps.Blosc]] deps = ["Blosc_jll"] -git-tree-sha1 = "575bdd70552dd9a7eaeba08ef2533226cdc50779" +git-tree-sha1 = "310b77648d38c223d947ff3f50f511d08690b8d5" uuid = "a74b3585-a348-5f62-a45c-50e91977d574" -version = "0.7.2" +version = "0.7.3" [[deps.Blosc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Pkg", "Zlib_jll", "Zstd_jll"] @@ -343,27 +374,27 @@ uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" [[deps.CEnum]] -git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" -version = "0.4.1" +version = "0.4.2" [[deps.CFTime]] deps = ["Dates", "Printf"] -git-tree-sha1 = "bca6cb6ee746e6485ca4535f6cc29cf3579a0f20" +git-tree-sha1 = "ed2e76c1c3c43fd9d0cb9248674620b29d71f2d1" uuid = "179af706-886a-5703-950a-314cd64e0468" -version = "0.1.1" +version = "0.1.2" [[deps.CPUSummary]] -deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" +deps = ["CpuId", "IfElse", "Static"] +git-tree-sha1 = "8a43595f7b3f7d6dd1e07ad9b94081e1975df4af" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.7" +version = "0.1.25" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "49f14b6c56a2da47608fe30aed711b5882264d7a" +git-tree-sha1 = "873fb188a4b9d76549b81465b1f75c82aaf59238" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.9.11" +version = "0.10.4" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] @@ -372,10 +403,10 @@ uuid = "159f3aea-2a34-519c-b102-8c37f9878175" version = "1.0.5" [[deps.CairoMakie]] -deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" +deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA"] +git-tree-sha1 = "387e0102f240244102814cf73fe9fbbad82b9e9e" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.7.2" +version = "0.8.13" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -383,6 +414,12 @@ git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" version = "1.16.1+1" +[[deps.Calculus]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" +uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9" +version = "0.5.1" + [[deps.CatViews]] deps = ["Random", "Test"] git-tree-sha1 = "23d1f1e10d4e24374112fcf800ac981d14a54b24" @@ -391,27 +428,27 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" +git-tree-sha1 = "80ca332f6dcb2508adba68f22f551adb2d00a624" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.12.0" +version = "1.15.3" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "bf98fa45a0a4cee295de98d4c1462be26345b9a1" +git-tree-sha1 = "38f7a08f19d8810338d4f5085211c7dfa5d5bdd8" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.2" +version = "0.1.4" [[deps.ClimateModels]] -deps = ["AWS", "CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"] -git-tree-sha1 = "7e9ebc6da08f73d6fc16e7805245ec03b7efc3fd" +deps = ["CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"] +git-tree-sha1 = "26c2a0ba4f7d3542177943181e7b61722daa3c2a" uuid = "f6adb021-9183-4f40-84dc-8cea6f651bb0" -version = "0.2.2" +version = "0.2.10" [[deps.CloseOpenIntervals]] deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "7b8f09d58294dc8aa13d91a8544b37c8a1dcbc06" +git-tree-sha1 = "5522c338564580adf5d58d91e43a55db0fa5fb39" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.4" +version = "0.1.10" [[deps.CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -426,22 +463,22 @@ uuid = "a2cac450-b92f-5266-8821-25eda20663c8" version = "0.4.0" [[deps.ColorSchemes]] -deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random"] +git-tree-sha1 = "1fd869cc3875b57347f7027521f561cf46d1fcd8" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.16.0" +version = "3.19.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] -git-tree-sha1 = "024fe24d83e4a5bf5fc80501a314ce0d1aa35597" +git-tree-sha1 = "eb7f0f8307f71fac7c606984ea5fb2817275d6e4" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" -version = "0.11.0" +version = "0.11.4" [[deps.ColorVectorSpace]] deps = ["ColorTypes", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "TensorCore"] -git-tree-sha1 = "3f1f500312161f1ae067abe07d13b40f78f32e07" +git-tree-sha1 = "d08c20eef1f2cbc6e60fd3612ac4340b89fea322" uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4" -version = "0.9.8" +version = "0.9.9" [[deps.Colors]] deps = ["ColorTypes", "FixedPointNumbers", "Reexport"] @@ -450,9 +487,9 @@ uuid = "5ae59095-9a9b-59fe-a467-6f913c188581" version = "0.12.8" [[deps.CommonSolve]] -git-tree-sha1 = "68a0743f578349ada8bc911a5cbd5a2ef6ed6d1f" +git-tree-sha1 = "332a332c97c7071600984b3c31d9067e1a4e6e25" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.0" +version = "0.2.1" [[deps.CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -462,9 +499,9 @@ version = "0.3.0" [[deps.Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] -git-tree-sha1 = "44c37b4636bc54afac5c574d2d02b625349d6582" +git-tree-sha1 = "78bee250c6826e1cf805a88b7f1e86025275d208" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" -version = "3.41.0" +version = "3.46.0" [[deps.CompilerSupportLibraries_jll]] deps = ["Artifacts", "Libdl"] @@ -472,15 +509,20 @@ uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f74e9d5388b8620b4cee35d4c5a618dd4dc547f4" +git-tree-sha1 = "fb21ddd70a051d882a1686a5a550990bbe371a95" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.3.0" +version = "1.4.1" [[deps.Contour]] -deps = ["StaticArrays"] -git-tree-sha1 = "9f02045d934dc030edad45944ea80dbd1f0ebea7" +git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" -version = "0.5.7" +version = "0.6.2" + +[[deps.CpuId]] +deps = ["Markdown"] +git-tree-sha1 = "fcbb72b032692610bfbdb15018ac16a36cf2e406" +uuid = "adafc99b-e345-5852-983c-f28acb93d879" +version = "0.3.1" [[deps.Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" @@ -492,28 +534,22 @@ git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" uuid = "6023044f-b3ef-4c22-8399-3ec90a0c9b75" version = "0.5.0" -[[deps.DEDataArrays]] -deps = ["ArrayInterface", "DocStringExtensions", "LinearAlgebra", "RecursiveArrayTools", "SciMLBase", "StaticArrays"] -git-tree-sha1 = "31186e61936fbbccb41d809ad4338c9f7addf7ae" -uuid = "754358af-613d-5f8d-9788-280bf1605d4c" -version = "0.2.0" - [[deps.DataAPI]] -git-tree-sha1 = "cc70b17275652eb47bc9e5f81635981f13cea5c8" +git-tree-sha1 = "fb5f5316dd3fd4c5e7c30a24d50643b73e37cd40" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.9.0" +version = "1.10.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" +git-tree-sha1 = "daa21eb85147f72e41f6352a57fccea377e310a9" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.2" +version = "1.3.4" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] -git-tree-sha1 = "3daef5523dd2e769dad2365274f760ff5f282c7d" +git-tree-sha1 = "d1fff3a548102f48987a52a2e0d114fa97d730f0" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" -version = "0.18.11" +version = "0.18.13" [[deps.DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" @@ -535,10 +571,10 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" +deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "665832fd81cd961aad28fa7009d4aaa23a07db57" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.81.3" +version = "6.98.2" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -548,14 +584,15 @@ version = "1.0.3" [[deps.DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" +git-tree-sha1 = "992a23afdb109d0d2f8802a30cf5ae4b1fe7ea68" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.1" +version = "1.11.1" [[deps.DiskArrays]] -git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" +deps = ["OffsetArrays"] +git-tree-sha1 = "230d999fc78652ea070312373ed1bfe2489e4fe5" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.3.0" +version = "0.3.6" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -569,49 +606,54 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" +git-tree-sha1 = "334a5896c1534bb1aa7aa2a642d30ba7707357ef" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.42" +version = "0.25.68" [[deps.DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "5158c2b41018c5f7eb1470d558127ac274eca0c9" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.1" [[deps.Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6" +[[deps.DualNumbers]] +deps = ["Calculus", "NaNMath", "SpecialFunctions"] +git-tree-sha1 = "5837a837389fccf076445fce071c8ddaea35a566" +uuid = "fa6b7ba4-c1ee-5f82-b5fc-ecf0adba8f74" +version = "0.6.8" + [[deps.EarCut_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "3f3a2501fa7236e9b911e0f7a588c657e822bb6d" uuid = "5ae413db-bbd1-5e63-b57d-d24a61df00f5" version = "2.2.3+0" -[[deps.EllipsisNotation]] -deps = ["ArrayInterface"] -git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" -uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.3.0" - [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "b3bfd02e98aedfa5cf885665493c5598c350cd2f" +git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d" uuid = "2e619515-83b5-522b-bb60-26c02a35a201" -version = "2.2.10+0" +version = "2.4.8+0" [[deps.ExponentialUtilities]] -deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" +deps = ["ArrayInterfaceCore", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "b40c9037e1a33990466bc5d224ced34b34eebdb0" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.11.0" +version = "1.18.0" [[deps.ExprTools]] git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.8" +[[deps.Extents]] +git-tree-sha1 = "5e1e4c53fa39afe63a7d356e30452249365fba99" +uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910" +version = "0.1.1" + [[deps.EzXML]] deps = ["Printf", "XML2_jll"] git-tree-sha1 = "0fa3b52a04a4e210aeb1626def9c90df3ae65268" @@ -625,16 +667,16 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "d8a578692e3077ac998b50c0217dfd67f21d1e5f" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libaom_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "ccd479984c7838684b3ac204b716c89955c76623" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.4.0+0" +version = "4.4.2+0" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] -git-tree-sha1 = "463cb335fa22c4ebacfd1faba5fde14edb80d96c" +git-tree-sha1 = "90630efff0894f8142308e334473eba54c433549" uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341" -version = "1.4.5" +version = "1.5.0" [[deps.FFTW_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -643,39 +685,45 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" +deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] +git-tree-sha1 = "21cdeff41e5a1822c2acd7fc7934c5f450588e00" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.12" +version = "0.2.1" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" uuid = "9aa1b823-49e4-5ca5-8b0f-3971ec8bab6a" version = "0.3.2" +[[deps.FastLapackInterface]] +deps = ["LinearAlgebra"] +git-tree-sha1 = "cfd9d0dbb947181644c00bd7e988b4bb30a5b2a5" +uuid = "29a986be-02c6-4525-aec4-84b980013641" +version = "1.2.6" + [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" +git-tree-sha1 = "94f5101b96d2d968ace56f7f2db19d0a5f592e28" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.12.0" +version = "1.15.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] -git-tree-sha1 = "04d13bfa8ef11720c24e4d840c0033d145537df7" +git-tree-sha1 = "316daa94fad0b7a008ebd573e002efd6609d85ac" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" -version = "0.9.17" +version = "0.9.19" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "8756f9935b7ccc9064c6eef0bff0ad643df733a3" +git-tree-sha1 = "246621d23d1f43e3b9c368bf3b72b2331a27c286" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.7" +version = "0.13.2" [[deps.FiniteDiff]] -deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" +deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "5a2cff9b6b77b33b89f3d97a4d367747adce647e" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.10.0" +version = "2.15.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -702,9 +750,9 @@ version = "0.6.0" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" +git-tree-sha1 = "187198a4ed8ccd7b5d99c41b69c679269ea2b2d4" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.25" +version = "0.10.32" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -719,10 +767,10 @@ uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" version = "2.10.4+0" [[deps.FreeTypeAbstraction]] -deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics", "StaticArrays"] -git-tree-sha1 = "770050893e7bc8a34915b4b9298604a3236de834" +deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"] +git-tree-sha1 = "b5c7fe9cea653443736d264b85466bad8c574f4a" uuid = "663a7486-cb36-511b-a19d-713bb74d65c9" -version = "0.9.5" +version = "0.9.9" [[deps.FriBidi_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -735,15 +783,39 @@ git-tree-sha1 = "241552bc2209f0fa068b6415b1942cc0aa486bcc" uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" version = "1.1.2" +[[deps.FunctionWrappersWrappers]] +deps = ["FunctionWrappers"] +git-tree-sha1 = "a5e6e7f12607e90d71b09e6ce2c965e41b337968" +uuid = "77dc65aa-8811-40c2-897b-53d922fa7daf" +version = "0.1.1" + [[deps.Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" +[[deps.GPUArraysCore]] +deps = ["Adapt"] +git-tree-sha1 = "6872f5ec8fd1a38880f027a26739d42dcda6691f" +uuid = "46192b85-c4d5-4398-a991-12ede77f4527" +version = "0.1.2" + +[[deps.GenericSchur]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "fb69b2a645fa69ba5f474af09221b9308b160ce6" +uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" +version = "0.5.3" + +[[deps.GeoInterface]] +deps = ["Extents"] +git-tree-sha1 = "fb28b5dc239d0174d7297310ef7b84a11804dfab" +uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f" +version = "1.0.1" + [[deps.GeometryBasics]] -deps = ["EarCut_jll", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] -git-tree-sha1 = "58bcdf5ebc057b085e58d95c138725628dd7453c" +deps = ["EarCut_jll", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"] +git-tree-sha1 = "a7a97895780dab1085a97769316aa348830dc991" uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" -version = "0.4.1" +version = "0.4.3" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -759,9 +831,9 @@ version = "1.2.1" [[deps.GitHub]] deps = ["Base64", "Dates", "HTTP", "JSON", "MbedTLS", "Sockets", "SodiumSeal", "URIs"] -git-tree-sha1 = "056781ae7b953289778408b136f8708a46837979" +git-tree-sha1 = "f1d3170f588c7610b568c9a97971915100dd51e8" uuid = "bc5e4493-9b4d-5f90-b8aa-2b2bcaad7a26" -version = "5.7.2" +version = "5.7.3" [[deps.Git_jll]] deps = ["Artifacts", "Expat_jll", "Gettext_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Pkg", "Zlib_jll"] @@ -777,9 +849,9 @@ version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] -git-tree-sha1 = "1c5a84319923bea76fa145d49e93aa4394c73fc2" +git-tree-sha1 = "d61890399bc535850c4bf08e4e0d3a7ad0f21cbd" uuid = "a2bd30eb-e257-5431-a919-1863eab51364" -version = "1.1.1" +version = "1.1.2" [[deps.Graphite2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -789,15 +861,15 @@ version = "1.3.14+0" [[deps.Graphs]] deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" +git-tree-sha1 = "a6d30bdc378d340912f48abf01281aab68c0dec8" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.5.1" +version = "1.7.2" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] -git-tree-sha1 = "70938436e2720e6cb8a7f2ca9f1bbdbf40d7f5d0" +git-tree-sha1 = "53c7e69a6ffeb26bd594f5a1421b889e7219eeaa" uuid = "3955a311-db13-416c-9275-1d80ed98e5e9" -version = "0.6.4" +version = "0.9.0" [[deps.Grisu]] git-tree-sha1 = "53bb909d1151e57e2484c3d1b53e19552b887fb2" @@ -806,9 +878,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" +git-tree-sha1 = "c003b31e2e818bc512b0ff99d7dce03b0c1359f5" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.1+0" +version = "1.12.2+1" [[deps.HTTP]] deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"] @@ -824,21 +896,15 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" +git-tree-sha1 = "b7b88a4716ac33fe31d6556c02fc60017594343c" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.6" - -[[deps.Hwloc]] -deps = ["Hwloc_jll"] -git-tree-sha1 = "92d99146066c5c6888d5a3abc871e6a214388b91" -uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" -version = "2.0.0" +version = "0.1.8" -[[deps.Hwloc_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" -uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.7.0+0" +[[deps.HypergeometricFunctions]] +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] +git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" +version = "0.3.11" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -847,15 +913,15 @@ version = "0.1.1" [[deps.ImageCore]] deps = ["AbstractFFTs", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Graphics", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "Reexport"] -git-tree-sha1 = "9a5c62f231e5bba35695a20988fc7cd6de7eeb5a" +git-tree-sha1 = "acf614720ef026d38400b3817614c45882d75500" uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" -version = "0.9.3" +version = "0.9.4" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] -git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" +deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "342f789fd041a55166764c351da1710db97ce0e0" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.6.0" +version = "0.6.6" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -870,26 +936,25 @@ version = "1.0.0" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" +git-tree-sha1 = "025aa6e551a577d2ce282054502a16347c17b7f5" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.8" +version = "0.3.9" [[deps.Inflate]] -git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" +git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" -version = "0.1.2" +version = "0.1.3" [[deps.IniFile]] -deps = ["Test"] -git-tree-sha1 = "098e4d2c533924c921f9f9847274f2ad89e018b8" +git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.0" +version = "0.5.1" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" +git-tree-sha1 = "d19f9edd8c34760dca2de2b503f969d8700ed288" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.2" +version = "1.1.4" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -902,22 +967,22 @@ deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240" [[deps.Interpolations]] -deps = ["AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] -git-tree-sha1 = "b15fc0a95c564ca2e0a7ae12c1f095ca848ceb31" +deps = ["Adapt", "AxisAlgorithms", "ChainRulesCore", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "Requires", "SharedArrays", "SparseArrays", "StaticArrays", "WoodburyMatrices"] +git-tree-sha1 = "64f138f9453a018c8f3562e7bae54edc059af249" uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59" -version = "0.13.5" +version = "0.14.4" [[deps.IntervalSets]] -deps = ["Dates", "EllipsisNotation", "Statistics"] -git-tree-sha1 = "3cc368af3f110a767ac786560045dceddfc16758" +deps = ["Dates", "Random", "Statistics"] +git-tree-sha1 = "076bb0da51a8c8d1229936a1af7bdfacd65037e1" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.5.3" +version = "0.7.2" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "a7254c0acd8e62f1ac75ad24d5db43f5f19f3c65" +git-tree-sha1 = "b3364212fb5d870f724876ffcd34dd8ec6d98918" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.2" +version = "0.1.7" [[deps.InvertedIndices]] git-tree-sha1 = "bee5f1ef5bf65df56bdd2e40447590b272a5471f" @@ -951,41 +1016,59 @@ git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" uuid = "82899510-4779-5014-852e-03e436cf321d" version = "1.0.0" +[[deps.JLD2]] +deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "Pkg", "Printf", "Reexport", "TranscodingStreams", "UUIDs"] +git-tree-sha1 = "81b9477b49402b47fbe7f7ae0b252077f53e4a08" +uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819" +version = "0.4.22" + [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" +git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.4.0" +version = "1.4.1" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" 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"591e8dc09ad18386189610acafb970032c519707" +git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.3" +version = "0.6.5" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +git-tree-sha1 = "a2327039e1c84615e22d662adb3df113caf44b70" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.7.11" +version = "0.8.3" [[deps.KrylovKit]] deps = ["LinearAlgebra", "Printf"] -git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +git-tree-sha1 = "49b0c1dd5c292870577b8f58c51072bd558febb9" uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" -version = "0.5.3" +version = "0.5.4" [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1009,22 +1092,21 @@ git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" -[[deps.LabelledArrays]] -deps = ["ArrayInterface", 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"b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" @@ -1082,34 +1164,34 @@ version = "2.36.0+0" [[deps.LineSearches]] deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf"] -git-tree-sha1 = "f27132e551e959b3667d8c93eae90973225032dd" +git-tree-sha1 = "7bbea35cec17305fc70a0e5b4641477dc0789d9d" uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255" -version = "7.1.1" +version = "7.2.0" [[deps.LinearAlgebra]] deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] -git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +deps = ["ArrayInterfaceCore", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "af8c2f07401cb3c39ad05542adf053314ea37ec8" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.11.1" +version = "1.25.0" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" +git-tree-sha1 = "94d9c52ca447e23eac0c0f074effbcd38830deb5" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.6" +version = "0.3.18" [[deps.Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" +deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "60613258cc56b6c7c909f3e960e8b3b4e86dc2f2" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.101" +version = "0.12.124" [[deps.Lz4_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1125,9 +1207,9 @@ version = "0.2.1" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "5455aef09b40e5020e1520f551fa3135040d4ed0" +git-tree-sha1 = "41d162ae9c868218b1f3fe78cba878aa348c2d26" uuid = "856f044c-d86e-5d09-b602-aeab76dc8ba7" -version = "2021.1.1+2" +version = "2022.1.0+0" [[deps.MacroTools]] deps = ["Markdown", "Random"] @@ -1136,21 +1218,21 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "b0323393a7190c9bf5b03af442fc115756df8e59" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.16.3" +version = "0.17.13" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" +git-tree-sha1 = "fbf705d2bdea8fc93f1ae8ca2965d8e03d4ca98c" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.2.1" +version = "0.4.0" [[deps.ManualMemory]] -git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" +git-tree-sha1 = "bcaef4fc7a0cfe2cba636d84cda54b5e4e4ca3cd" uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" -version = "0.1.6" +version = "0.1.8" [[deps.MappedArrays]] git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" @@ -1168,15 +1250,15 @@ version = "1.2.0" [[deps.MathTeXEngine]] deps = ["AbstractTrees", "Automa", "DataStructures", "FreeTypeAbstraction", "GeometryBasics", "LaTeXStrings", "REPL", "RelocatableFolders", "Test"] -git-tree-sha1 = "70e733037bbf02d691e78f95171a1fa08cdc6332" +git-tree-sha1 = "114ef48a73aea632b8aebcb84f796afcc510ac7c" uuid = "0a4f8689-d25c-4efe-a92b-7142dfc1aa53" -version = "0.2.1" +version = "0.4.3" [[deps.MbedTLS]] -deps = ["Dates", "MbedTLS_jll", "Random", "Sockets"] -git-tree-sha1 = "1c38e51c3d08ef2278062ebceade0e46cefc96fe" +deps = ["Dates", "MbedTLS_jll", "MozillaCACerts_jll", "Random", "Sockets"] +git-tree-sha1 = "2f0be365951a88dfb084f754005177e6dfb00ed0" uuid = "739be429-bea8-5141-9913-cc70e7f3736d" -version = "1.0.3" +version = "1.1.4" [[deps.MbedTLS_jll]] deps = ["Artifacts", "Libdl"] @@ -1217,6 +1299,12 @@ git-tree-sha1 = "c6190f9a7fc5d9d5915ab29f2134421b12d24a68" uuid = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221" version = "0.2.2" +[[deps.NCDatasets]] +deps = ["CFTime", "DataStructures", "Dates", "NetCDF_jll", "NetworkOptions", "Printf"] +git-tree-sha1 = "16463e1587495780aa05e05440f16959042bfcb1" +uuid = "85f8d34a-cbdd-5861-8df4-14fed0d494ab" +version = "0.12.7" + [[deps.NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] git-tree-sha1 = "50310f934e55e5ca3912fb941dec199b49ca9b68" @@ -1230,27 +1318,28 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" +deps = ["OpenLibm_jll"] +git-tree-sha1 = "a7c3d1da1189a1c2fe843a3bfa04d18d20eb3211" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.7" +version = "1.0.1" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] -git-tree-sha1 = "16baacfdc8758bc374882566c9187e785e85c2f0" +git-tree-sha1 = "0e353ed734b1747fc20cd4cba0edd9ac027eff6a" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.9" +version = "0.4.11" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" +git-tree-sha1 = "328178762645783b20495d408ab317b4c2d25b1a" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.4" +version = "0.11.7" [[deps.NetCDF_jll]] -deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" +deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Pkg", "XML2_jll", "Zlib_jll"] +git-tree-sha1 = "072f8371f74c3b9e1b26679de7fbf059d45ea221" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.802.101+0" +version = "400.902.5+1" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1262,27 +1351,27 @@ version = "1.0.2" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] -deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" +deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] +git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.14" +version = "0.3.22" [[deps.Observables]] -git-tree-sha1 = "fe29afdef3d0c4a8286128d4e45cc50621b1e43d" +git-tree-sha1 = "dfd8d34871bc3ad08cd16026c1828e271d554db9" uuid = "510215fc-4207-5dde-b226-833fc4488ee2" -version = "0.4.0" +version = "0.5.1" [[deps.OceanStateEstimation]] -deps = ["Artifacts", "CodecZlib", "Downloads", "FortranFiles", "LazyArtifacts", "MITgcmTools", "MeshArrays", "Statistics", "Tar"] -git-tree-sha1 = "6f52efdb2a7a921bb4912e544af574bb07523f0a" +deps = ["Artifacts", "CodecZlib", "Distributed", "Downloads", "FortranFiles", "JLD2", "LazyArtifacts", "MITgcmTools", "MeshArrays", "NCDatasets", "Pkg", "Printf", "SharedArrays", "Statistics", "TOML", "Tar"] +git-tree-sha1 = "bbe8f5ab284cbe0facb7a29b0fa1e636835a1d4f" uuid = "891f6deb-a4f5-4bc5-a2e3-1e8f649cdd2c" -version = "0.2.0" +version = "0.2.9" [[deps.OffsetArrays]] deps = ["Adapt"] -git-tree-sha1 = "043017e0bdeff61cfbb7afeb558ab29536bbb5ed" +git-tree-sha1 = "1ea784113a6aa054c5ebd95945fa5e52c2f378e7" uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881" -version = "1.10.8" +version = "1.12.7" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1312,9 +1401,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" +git-tree-sha1 = "e60321e3f2616584ff98f0a4f18d98ae6f89bbb3" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.13+0" +version = "1.1.17+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1334,10 +1423,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" +deps = ["Adapt", "ArrayInterface", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "4cf346be836dcafdfa8359fc0f593ad5860ba7cf" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.6.5" +version = "6.24.4" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1351,15 +1440,15 @@ version = "8.44.0+0" [[deps.PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "ee26b350276c51697c9c2d88a072b339f9f03d73" +git-tree-sha1 = "cf494dca75a69712a72b80bc48f59dcf3dea63ec" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" -version = "0.11.5" +version = "0.11.16" [[deps.PNGFiles]] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] -git-tree-sha1 = "6d105d40e30b635cfed9d52ec29cf456e27d38f8" +git-tree-sha1 = "e925a64b8585aa9f4e3047b8d2cdc3f0e79fd4e4" uuid = "f57f5aa1-a3ce-4bc8-8ab9-96f992907883" -version = "0.3.12" +version = "0.3.16" [[deps.Packing]] deps = ["GeometryBasics"] @@ -1375,9 +1464,9 @@ version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9bc1871464b12ed19297fbc56c4fb4ba84988b0d" +git-tree-sha1 = "3a121dfbba67c94a5bec9dde613c3d0cbcf3a12b" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.47.0+0" +version = "1.50.3+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1387,9 +1476,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" +git-tree-sha1 = "3d5bf43e3e8b412656404ed9466f1dcbf7c50269" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.2.1" +version = "2.4.0" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1403,27 +1492,27 @@ uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" [[deps.PkgVersion]] deps = ["Pkg"] -git-tree-sha1 = "a7a7e1a88853564e551e4eba8650f8c38df79b37" +git-tree-sha1 = "f6cf8e7944e50901594838951729a1861e668cb8" uuid = "eebad327-c553-4316-9ea0-9fa01ccd7688" -version = "0.1.1" +version = "0.3.2" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" +git-tree-sha1 = "9888e59493658e476d3073f1ce24348bdc086660" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.3" +version = "1.3.0" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" +git-tree-sha1 = "94e20822bd7427b1b1b843a3980003f5d5e8696b" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.3" +version = "0.6.14" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" +git-tree-sha1 = "233feae14c07cca6b95080f77a7d332612603f6a" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.3" +version = "0.1.9" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1432,21 +1521,21 @@ version = "0.1.2" [[deps.PooledArrays]] deps = ["DataAPI", "Future"] -git-tree-sha1 = "db3a23166af8aebf4db5ef87ac5b00d36eb771e2" +git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" -version = "1.4.0" +version = "1.4.2" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" +deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff", "ReverseDiff"] +git-tree-sha1 = "5c076a409ec8d2a86d3685a7e4fed330cd489889" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.3" +version = "0.4.2" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" +git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.3" +version = "1.3.0" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] @@ -1460,9 +1549,9 @@ uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7" [[deps.ProgressMeter]] deps = ["Distributed", "Printf"] -git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" +git-tree-sha1 = "d7a7aef8f8f2d537104f170139553b14dfe39fe9" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" -version = "1.7.1" +version = "1.7.2" [[deps.QOI]] deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] @@ -1486,9 +1575,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Ratios]] deps = ["Requires"] -git-tree-sha1 = "01d341f502250e81f6fec0afe662aa861392a3aa" +git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.2" +version = "0.4.3" [[deps.RecipesBase]] git-tree-sha1 = "6bf3f380ff52ce0832ddd3a2a7b9538ed1bcca7d" @@ -1496,16 +1585,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "3004608dc42101a944e44c1c68b599fa7c669080" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.24.1" +version = "2.32.0" [[deps.RecursiveFactorization]] -deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" +deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] +git-tree-sha1 = "0a2dfb3358fcde3676beb75405e782faa8c9aded" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.9" +version = "0.2.12" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1514,9 +1603,9 @@ version = "1.2.2" [[deps.RelocatableFolders]] deps = ["SHA", "Scratch"] -git-tree-sha1 = "cdbd3b1338c72ce29d9584fdbe9e9b70eeb5adca" +git-tree-sha1 = "22c5201127d7b243b9ee1de3b43c408879dff60f" uuid = "05181044-ff0b-4ac5-8273-598c1e38db00" -version = "0.1.3" +version = "0.3.0" [[deps.Requires]] deps = ["UUIDs"] @@ -1529,6 +1618,12 @@ git-tree-sha1 = "41ac127cd281bb33e42aba46a9d3b25cd35fc6d5" uuid = "20febd7b-183b-5ae2-ac4a-720e7ce64774" version = "0.4.1" +[[deps.ReverseDiff]] +deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] +git-tree-sha1 = "b8e2eb3d8e1530acb73d8949eab3cedb1d43f840" +uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" +version = "1.14.1" + [[deps.Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "bf3188feca147ce108c76ad82c2792c57abe7b1f" @@ -1545,15 +1640,15 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" +git-tree-sha1 = "7dbc15af7ed5f751a82bf3ed37757adf76c32402" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.4.0" +version = "3.4.1" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] -git-tree-sha1 = "62c2da6eb66de8bb88081d20528647140d4daa0e" +git-tree-sha1 = "dd4195d308df24f33fb10dde7c22103ba88887fa" uuid = "3cdde19b-5bb0-4aaf-8931-af3e248e098b" -version = "0.1.0" +version = "0.1.1" [[deps.SIMDTypes]] git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c" @@ -1562,42 +1657,42 @@ version = "0.1.0" [[deps.SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "1410aad1c6b35862573c01b96cd1f6dbe3979994" +git-tree-sha1 = "2ba4fee025f25d6711487b73e1ac177cbd127913" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.28" +version = "0.6.35" [[deps.ScanByte]] deps = ["Libdl", "SIMD"] -git-tree-sha1 = "9cc2955f2a254b18be655a4ee70bc4031b2b189e" +git-tree-sha1 = "2436b15f376005e8790e318329560dcc67188e84" uuid = "7b38b023-a4d7-4c5e-8d43-3f3097f304eb" -version = "0.3.0" +version = "0.3.3" [[deps.SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "RecipesBase", "RecursiveArrayTools", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "adbb628d4116d9d87e41b6d678772c44877d442c" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.26.1" +version = "1.52.0" [[deps.Scratch]] deps = ["Dates"] -git-tree-sha1 = "0b4b7f1393cff97c33891da2a0bf69c6ed241fda" +git-tree-sha1 = "f94f779c94e58bf9ea243e77a37e16d9de9126bd" uuid = "6c6a2e73-6563-6170-7368-637461726353" -version = "1.1.0" +version = "1.1.1" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" +git-tree-sha1 = "db8481cf5d6278a121184809e9eb1628943c7704" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.11" +version = "1.3.13" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" [[deps.Setfield]] -deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] -git-tree-sha1 = "0afd9e6c623e379f593da01f20590bacc26d1d14" +deps = ["ConstructionBase", "Future", "MacroTools", "StaticArraysCore"] +git-tree-sha1 = "e2cc6d8c88613c05e1defb55170bf5ff211fbeac" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" -version = "0.8.1" +version = "1.1.1" [[deps.SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] @@ -1627,6 +1722,11 @@ git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" version = "0.1.2" +[[deps.SnoopPrecompile]] +git-tree-sha1 = "f604441450a3c0569830946e5b33b78c928e1a85" +uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" +version = "1.0.1" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1647,16 +1747,16 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] -deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] +git-tree-sha1 = "5fb8ba9180f467885e87a2c99cae178b67934be1" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.20.0" +version = "1.26.2" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" +git-tree-sha1 = "d75bda01f8c31ebb72df80a46c88b25d1c79c56d" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.1.0" +version = "2.1.7" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1666,48 +1766,54 @@ version = "0.1.1" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "7f5a513baec6f122401abfc8e9c074fdac54f6c1" +git-tree-sha1 = "f94f9d627ba3f91e41a815b9f9f977d729e2e06f" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.4.1" +version = "0.7.6" [[deps.StaticArrays]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" +deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "dfec37b90740e3b9aa5dc2613892a3fc155c3b42" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.3.3" +version = "1.5.6" + +[[deps.StaticArraysCore]] +git-tree-sha1 = "ec2bd695e905a3c755b33026954b119ea17f2d22" +uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" +version = "1.3.0" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" +deps = ["LinearAlgebra"] +git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.2.0" +version = "1.5.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" +git-tree-sha1 = "d1bf48bfcc554a3761a133fe3a9bb01488e06916" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.14" +version = "0.33.21" [[deps.StatsFuns]] -deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" +deps = ["ChainRulesCore", "HypergeometricFunctions", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] +git-tree-sha1 = "5783b877201a82fc0014cbf381e7e6eb130473a4" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.15" +version = "1.0.1" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "12cf3253ebd8e2a3214ae171fbfe51e7e8d8ad28" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] +git-tree-sha1 = "ac730bd978bf35f9fe45daa0bd1f51e493e97eb4" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.2.9" +version = "0.3.15" [[deps.StructArrays]] -deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" +deps = ["Adapt", "DataAPI", "StaticArraysCore", "Tables"] +git-tree-sha1 = "8c6ac65ec9ab781af05b08ff305ddc727c25f680" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.4" +version = "0.6.12" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] @@ -1718,9 +1824,9 @@ deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" [[deps.Suppressor]] -git-tree-sha1 = "a819d77f31f83e5792a76081eee1ea6342ab8787" +git-tree-sha1 = "c6ed566db2fe3931292865b966d6d140b7ef32a9" uuid = "fd094767-a336-5f1f-9728-57cf17d0bbfb" -version = "0.2.0" +version = "0.2.1" [[deps.TOML]] deps = ["Dates"] @@ -1733,10 +1839,10 @@ uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" [[deps.Tables]] -deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] -git-tree-sha1 = "bb1064c9a84c52e277f1096cf41434b675cd368b" +deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "OrderedCollections", "TableTraits", "Test"] +git-tree-sha1 = "5ce79ce186cc678bbb5c5681ca3379d1ddae11a1" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -version = "1.6.1" +version = "1.7.0" [[deps.Tar]] deps = ["ArgTools", "SHA"] @@ -1754,38 +1860,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" +git-tree-sha1 = "f8629df51cab659d70d2e5618a430b4d3f37f2c3" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.7" +version = "0.5.0" [[deps.TiffImages]] -deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" +deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "Mmap", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] +git-tree-sha1 = "70e6d2da9210371c927176cb7a56d41ef1260db7" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.3" +version = "0.6.1" [[deps.TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "216b95ea110b5972db65aa90f88d8d89dcb8851c" +git-tree-sha1 = "8a75929dcd3c38611db2f8d08546decb514fcadf" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.6" - -[[deps.TreeViews]] -deps = ["Test"] -git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6" -uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7" -version = "0.3.0" +version = "0.9.9" [[deps.TriangularSolve]] -deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" +deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "Static", "VectorizationBase"] +git-tree-sha1 = "8987cf4a0f8d6c375e4ab1438a048e0a185151e4" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.9" +version = "0.1.13" [[deps.URIs]] -git-tree-sha1 = "97bbe755a53fe859669cd907f2d96aee8d2c1355" +git-tree-sha1 = "e59ecc5a41b000fa94423a578d29290c7266fc10" uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" -version = "1.3.0" +version = "1.4.0" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1807,15 +1907,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" +git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.10.1" +version = "1.11.0" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] +git-tree-sha1 = "05be19531ae910fb482db2d4c45e1aa1cde50560" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.24" +version = "0.21.47" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1825,9 +1925,9 @@ version = "0.2.0" [[deps.WeakRefStrings]] deps = ["DataAPI", "InlineStrings", "Parsers"] -git-tree-sha1 = "c69f9da3ff2f4f02e811c3323c22e5dfcb584cfa" +git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23" uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" -version = "1.4.1" +version = "1.4.2" [[deps.WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1837,9 +1937,9 @@ version = "0.5.5" [[deps.XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a" +git-tree-sha1 = "58443b63fb7e465a8a7210828c91c08b92132dff" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" -version = "2.9.12+0" +version = "2.9.14+0" [[deps.XMLDict]] deps = ["EzXML", "IterTools", "OrderedCollections"] @@ -1903,9 +2003,9 @@ version = "1.4.0+3" [[deps.Zarr]] deps = ["AWS", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "LRUCache", "OffsetArrays", "Pkg", "URIs"] -git-tree-sha1 = "47a53313f4493879345f217e20146c4c40774520" +git-tree-sha1 = "112e0085a58d5dc231864c98a5097ad1021d7466" uuid = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99" -version = "0.7.1" +version = "0.7.3" [[deps.Zlib_jll]] deps = ["Libdl"] @@ -1913,9 +2013,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "cc4bf3fdde8b7e3e9fa0351bdeedba1cf3b7f6e6" +git-tree-sha1 = "e45044cd873ded54b6a5bac0eb5c971392cf1927" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.0+0" +version = "1.5.2+0" [[deps.ZygoteRules]] deps = ["MacroTools"] @@ -1924,10 +2024,16 @@ uuid = "700de1a5-db45-46bc-99cf-38207098b444" version = "0.2.2" [[deps.isoband_jll]] -deps = ["Libdl", "Pkg"] -git-tree-sha1 = "a1ac99674715995a536bbce674b068ec1b7d893d" +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "51b5eeb3f98367157a7a12a1fb0aa5328946c03c" uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" -version = "0.2.2+0" +version = "0.2.3+0" + +[[deps.libaom_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "3a2ea60308f0996d26f1e5354e10c24e9ef905d4" +uuid = "a4ae2306-e953-59d6-aa16-d00cac43593b" +version = "3.4.0+0" [[deps.libass_jll]] deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] diff --git a/src/API.jl b/src/API.jl index 6c3c1e6a..6d1bbdc2 100644 --- a/src/API.jl +++ b/src/API.jl @@ -213,7 +213,12 @@ end function Individuals(𝐹::𝐹_Array2D,x,y, NT::NamedTuple = NamedTuple()) 📌=permutedims([[x[i];y[i]] for i in eachindex(x)]) - length(📌)==1 ? 📌=📌[1] : nothing + if length(📌)==1 + 📌=📌[1] + ∫=default_solver + else + ∫=ensemble_solver + end T=eltype(📌) 🔴 = DataFrame(ID=Int[], x=Float64[], y=Float64[], t=Float64[]) @@ -225,7 +230,6 @@ function Individuals(𝐹::𝐹_Array2D,x,y, NT::NamedTuple = NamedTuple()) 🆔=collect(1:size(📌,2)) haskey(NT,:🆔) ? 🆔=NT.🆔 : nothing - ∫=ensemble_solver haskey(NT,:∫) ? ∫=NT.∫ : nothing 𝐷=NamedTuple() @@ -236,7 +240,12 @@ end function Individuals(𝐹::𝐹_Array3D,x,y,z, NT::NamedTuple = NamedTuple()) 📌=permutedims([[x[i];y[i];z[i]] for i in eachindex(x)]) - length(📌)==1 ? 📌=📌[1] : nothing + if length(📌)==1 + 📌=📌[1] + ∫=default_solver + else + ∫=ensemble_solver + end T=eltype(📌) 🔴 = DataFrame(ID=Int[], x=Float64[], y=Float64[], z=Float64[], t=Float64[]) @@ -253,7 +262,6 @@ function Individuals(𝐹::𝐹_Array3D,x,y,z, NT::NamedTuple = NamedTuple()) 🆔=collect(1:size(📌,2)) haskey(NT,:🆔) ? 🆔=NT.🆔 : nothing - ∫=ensemble_solver haskey(NT,:∫) ? ∫=NT.∫ : nothing 𝐷=NamedTuple() @@ -264,7 +272,12 @@ end function Individuals(𝐹::𝐹_MeshArray2D,x,y,fid, NT::NamedTuple = NamedTuple()) 📌=permutedims([[x[i];y[i];fid[i]] for i in eachindex(x)]) - length(📌)==1 ? 📌=📌[1] : nothing + if length(📌)==1 + 📌=📌[1] + ∫=default_solver + else + ∫=ensemble_solver + end T=eltype(📌) 🔴 = DataFrame(ID=Int[], x=Float64[], y=Float64[], fid=Int64[], t=Float64[]) @@ -276,7 +289,6 @@ function Individuals(𝐹::𝐹_MeshArray2D,x,y,fid, NT::NamedTuple = NamedTuple 🆔=collect(1:size(📌,2)) haskey(NT,:🆔) ? 🆔=NT.🆔 : nothing - ∫=ensemble_solver haskey(NT,:∫) ? ∫=NT.∫ : nothing 𝐷=NamedTuple() @@ -287,7 +299,12 @@ end function Individuals(𝐹::𝐹_MeshArray3D,x,y,z,fid, NT::NamedTuple = NamedTuple()) 📌=permutedims([[x[i];y[i];z[i];fid[i]] for i in eachindex(x)]) - length(📌)==1 ? 📌=📌[1] : nothing + if length(📌)==1 + 📌=📌[1] + ∫=default_solver + else + ∫=ensemble_solver + end T=eltype(📌) 🔴 = DataFrame(ID=Int[], x=Float64[], y=Float64[], z=Float64[], fid=Int64[], t=Float64[]) @@ -304,7 +321,6 @@ function Individuals(𝐹::𝐹_MeshArray3D,x,y,z,fid, NT::NamedTuple = NamedTup 🆔=collect(1:size(📌,2)) haskey(NT,:🆔) ? 🆔=NT.🆔 : nothing - ∫=ensemble_solver haskey(NT,:∫) ? ∫=NT.∫ : nothing 𝐷=NamedTuple() @@ -336,6 +352,9 @@ function ∫!(𝐼::Individuals,𝑇::Tuple) if isa(sol,EnsembleSolution) np=length(sol) 📌[:] = deepcopy([sol[i].u[end] for i in 1:np]) + if isa(𝑃,𝐹_MeshArray3D)||isa(𝑃,𝐹_MeshArray2D) + [update_location!(i,𝑃) for i in 𝐼.📌] + end else nd=length(size(sol)) nd==3 ? 📌[:,:] = deepcopy(sol[:,:,end]) : 📌[:] = deepcopy(sol[:,end]) diff --git a/src/data_wrangling.jl b/src/data_wrangling.jl index f3d4a57e..bb02c9d3 100644 --- a/src/data_wrangling.jl +++ b/src/data_wrangling.jl @@ -47,10 +47,6 @@ function postprocess_MeshArray(sol,𝑃::FlowFields, 𝐷::NamedTuple; id=missin fIndex=[[sol[i][nd,end] for i in 1:np];[sol[i][nd,end] for i in 1:np]]; t=[fill(𝑇[1],np);fill(𝑇[2],np)] id=[id[:,1];id[:,1]] - elseif (size(sol,1)>1)&&(nd>2) - x=sol[1,:,:] - y=sol[2,:,:] - fIndex=sol[end,:,:] elseif (nd>2) x=[sol[1,i,j][1] for i in 1:nf, j in 1:nt] y=[sol[1,i,j][2] for i in 1:nf, j in 1:nt] @@ -59,15 +55,27 @@ function postprocess_MeshArray(sol,𝑃::FlowFields, 𝐷::NamedTuple; id=missin x=sol[1,:] y=sol[2,:] fIndex=sol[end,:] - nf=1 end 𝑃.u0.grid.nFaces==1 ? fIndex=ones(size(x)) : nothing df = DataFrame(ID=Int.(id[:]), x=x[:], y=y[:], fid=Int.(fIndex[:]), t=t[:]) + return df end +""" + update_location!(pos,𝑃) + +Update `pos` via `𝑃.update_location!` if needed. +""" +function update_location!(pos,𝑃) + g=𝑃.u0.grid + while MeshArrays.location_is_out(pos,g) + 𝑃.update_location!(pos) + end +end + """ add_lonlat!(df::DataFrame,XC,YC) @@ -101,7 +109,7 @@ function add_lonlat!(df::DataFrame,XC,YC,func::Function) g=XC.grid u=zeros(3) - for i in eachindex(df.lon) + for i in eachindex(df.x) u[:]=[df.x[i];df.y[i];df.fid[i]] while MeshArrays.location_is_out(u,g) func(u) @@ -145,9 +153,6 @@ function postprocess_xy(sol,𝑃::FlowFields,𝐷::NamedTuple; id=missing, 𝑇= mod.([sol[i][2,end] for i in 1:np],Ref(ny))] t=[fill(𝑇[1],np);fill(𝑇[2],np)] id=[id[:,1];id[:,1]] - elseif (size(sol,1)>1)&&(nd>2) - x=mod.(sol[1,:,:],Ref(nx)) - y=mod.(sol[2,:,:],Ref(ny)) elseif (nd>2) x=[mod(sol[1,i,j][1],nx) for i in 1:nf, j in 1:nt] y=[mod(sol[1,i,j][2],ny) for i in 1:nf, j in 1:nt]