diff --git a/docs/src/examples.md b/docs/src/examples.md index 83c41b87..be7c4d5e 100644 --- a/docs/src/examples.md +++ b/docs/src/examples.md @@ -3,7 +3,7 @@ The four examples outlined below form a tutorial of sorts that complements the [User Guide](@ref). They hopefully provide a useful jumping off point in order to configure `IndividualDisplacements.jl` for new problems. -Output from is `IndividualDisplacements.jl` is in [DataFrames.jl](https://juliadata.github.io/DataFrames.jl/latest/) tabular format which comes with powerful and convenient analysis methods. They can readily be plotted in space and time using e.g. `Plots.jl` or `Makie.jl`. +Output generated by `IndividualDisplacements.jl` is in [DataFrames.jl](https://juliadata.github.io/DataFrames.jl/latest/) tabular format which comes with powerful and convenient analysis methods. They can readily be plotted in space and time using, e.g. , [Plots.jl](https://docs.juliaplots.org/stable/) or [Makie.jl](https://makie.juliaplots.org/stable/). To rerun an example yourself, the recommended method is to copy the corresponding `notebook (code)` link, paste it into the [Pluto.jl](https://github.com/fonsp/Pluto.jl/wiki/πŸ”Ž-Basic-Commands-in-Pluto) prompt, and click `open`. diff --git a/examples/basics/random_flow_field.jl b/examples/basics/random_flow_field.jl index 7639bc72..cc554030 100644 --- a/examples/basics/random_flow_field.jl +++ b/examples/basics/random_flow_field.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.3 +# v0.17.7 using Markdown using InteractiveUtils @@ -218,17 +218,13 @@ end PLUTO_PROJECT_TOML_CONTENTS = """ [deps] CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" IndividualDisplacements = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -MeshArrays = "cb8c808f-1acf-59a3-9d2b-6e38d009f683" PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" [compat] -CairoMakie = "~0.6.6" -DataFrames = "~1.3.0" -IndividualDisplacements = "~0.3.5" -MeshArrays = "~0.2.31" -PlutoUI = "~0.7.24" +CairoMakie = "~0.7.2" +IndividualDisplacements = "~0.3.8" +PlutoUI = "~0.7.32" """ # ╔═║ 00000000-0000-0000-0000-000000000002 @@ -239,16 +235,16 @@ julia_version = "1.7.0" manifest_format = "2.0" [[deps.AbstractFFTs]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0" +deps = ["ChainRulesCore", "LinearAlgebra"] +git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.0.1" +version = "1.1.0" [[deps.AbstractPlutoDingetjes]] deps = ["Pkg"] -git-tree-sha1 = "abb72771fd8895a7ebd83d5632dc4b989b022b5b" +git-tree-sha1 = "8eaf9f1b4921132a4cff3f36a1d9ba923b14a481" uuid = "6e696c72-6542-2067-7265-42206c756150" -version = "1.1.2" +version = "1.1.4" [[deps.AbstractTrees]] git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" @@ -257,9 +253,9 @@ version = "0.3.4" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "84918055d15b3114ede17ac6a7182f68870c16f7" +git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.1" +version = "3.3.3" [[deps.Animations]] deps = ["Colors"] @@ -278,9 +274,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "265b06e2b1f6a216e0e8f183d28e4d354eab3220" +git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.1" +version = "3.2.2" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -302,9 +298,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "bc1317f71de8dce26ea67fcdf7eccc0d0693b75b" +git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.1" +version = "0.1.2" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -325,15 +321,15 @@ version = "0.1.1" [[deps.CPUSummary]] deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "87b0c9c6ee0124d6c1f4ce8cb035dcaf9f90b803" +git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.6" +version = "0.1.7" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "49f14b6c56a2da47608fe30aed711b5882264d7a" +git-tree-sha1 = "9519274b50500b8029973d241d32cfbf0b127d97" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.9.11" +version = "0.10.2" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] @@ -343,15 +339,15 @@ version = "1.0.5" [[deps.CairoMakie]] deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "774ff1cce3ae930af3948c120c15eeb96c886c33" +git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.6.6" +version = "0.7.2" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "f2202b55d816427cd385a9a4f3ffb226bee80f99" +git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" -version = "1.16.1+0" +version = "1.16.1+1" [[deps.CatViews]] deps = ["Random", "Test"] @@ -361,9 +357,9 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "4c26b4e9e91ca528ea212927326ece5918a04b47" +git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.11.2" +version = "1.12.0" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] @@ -391,9 +387,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "a851fec56cb73cfdf43762999ec72eff5b86882a" +git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.15.0" +version = "3.16.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -447,9 +443,9 @@ uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.5.7" [[deps.Crayons]] -git-tree-sha1 = "3f71217b538d7aaee0b69ab47d9b7724ca8afa0d" +git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" -version = "4.0.4" +version = "4.1.1" [[deps.CyclicArrays]] git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" @@ -469,9 +465,9 @@ version = "1.9.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "2e993336a3f68216be91eb8ee4625ebbaba19147" +git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.0" +version = "1.3.2" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -500,9 +496,9 @@ version = "0.4.0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "976a9d34dff2f2bad494cec64c32d54168db21b2" +git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.77.1" +version = "6.81.3" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -511,15 +507,15 @@ uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" version = "1.0.3" [[deps.DiffRules]] -deps = ["LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "9bc5dac3c8b6706b58ad5ce24cffd9861f07c94f" +deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] +git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.0" +version = "1.9.1" [[deps.DiskArrays]] -git-tree-sha1 = "6a50d800025a1664c99a8e819e0568c75e3ac0c7" +git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.2.12" +version = "0.3.0" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -533,9 +529,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "c1724611e6ae29c6094c8d9850e3136297ba7fff" +git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.36" +version = "0.25.42" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -555,9 +551,9 @@ version = "2.2.3+0" [[deps.EllipsisNotation]] deps = ["ArrayInterface"] -git-tree-sha1 = "3fe985505b4b667e1ae303c9ca64d181f09d5c05" +git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.1.3" +version = "1.3.0" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -567,9 +563,9 @@ version = "2.2.10+0" [[deps.ExponentialUtilities]] deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "1b873816d2cfc8c0fcb1edcb08e67fdf630a70b7" +git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.10.2" +version = "1.11.0" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -597,9 +593,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "e32a81c505ab234c992ca978f31ed8b0dabbc327" +git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.11" +version = "0.1.12" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -608,9 +604,9 @@ version = "0.3.2" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "2db648b6712831ecb333eae76dbfd1c156ca13bb" +git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.11.2" +version = "1.12.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -626,9 +622,9 @@ version = "0.12.7" [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "8b3c09b56acaf3c0e581c66638b85c8650ee9dca" +git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.8.1" +version = "2.10.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -650,9 +646,9 @@ version = "0.4.2" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "2b72a5624e289ee18256111657663721d59c143e" +git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.24" +version = "0.10.25" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -701,9 +697,9 @@ version = "0.21.0+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "74ef6288d071f58033d54fd6708d4bc23a8b8972" +git-tree-sha1 = "a32d672ac2c967f3deb8a81d828afc739c838a06" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.68.3+1" +version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -718,10 +714,10 @@ uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472" version = "1.3.14+0" [[deps.Graphs]] -deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "92243c07e786ea3458532e199eb3feee0e7e08eb" +deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] +git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.4.1" +version = "1.5.1" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] @@ -736,9 +732,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "fd83fa0bde42e01952757f01149dd968c06c4dba" +git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.0+1" +version = "1.12.1+0" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -748,9 +744,9 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "8f0dc80088981ab55702b04bba38097a44a1a3a9" +git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.5" +version = "0.1.6" [[deps.Hwloc]] deps = ["Hwloc_jll"] @@ -760,9 +756,9 @@ version = "2.0.0" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "3395d4d4aeb3c9d31f5929d32760d8baeee88aaf" +git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.5.0+0" +version = "2.7.0+0" [[deps.Hyperscript]] deps = ["Test"] @@ -793,10 +789,10 @@ uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" version = "0.9.3" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "TiffImages", "UUIDs"] -git-tree-sha1 = "a2951c93684551467265e0e32b577914f69532be" +deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.5.9" +version = "0.6.0" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -811,9 +807,9 @@ version = "1.0.0" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "580636fff0fe9a0d024f24c8b72e15fd684aeaa3" +git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.5" +version = "0.3.8" [[deps.Inflate]] git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" @@ -822,9 +818,9 @@ version = "0.1.2" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "8d70835a3759cdd75881426fced1508bb7b7e1b6" +git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.1" +version = "1.1.2" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -888,9 +884,9 @@ version = "1.0.0" [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "642a199af8b68253517b80bd3bfd17eb4e84df6e" +git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.3.0" +version = "1.4.0" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] @@ -898,12 +894,30 @@ git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.2" +[[deps.KLU]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] +git-tree-sha1 = "1ed18ccf6292d89abf85beba35b9399aeddff9b2" +uuid = "ef3ab10e-7fda-4108-b977-705223b18434" +version = "0.2.3" + [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] git-tree-sha1 = "591e8dc09ad18386189610acafb970032c519707" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" version = "0.6.3" +[[deps.Krylov]] +deps = ["LinearAlgebra", "Printf", "SparseArrays"] +git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" +version = "0.7.11" + +[[deps.KrylovKit]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" +version = "0.5.3" + [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c" @@ -923,15 +937,15 @@ version = "1.3.0" [[deps.LabelledArrays]] deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "3609bbf5feba7b22fb35fe7cb207c8c8d2e2fc5b" +git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.6.7" +version = "1.7.0" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "83b56449c39342a47f3fcdb3bc782bd6d66e1d97" +git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.4" +version = "0.1.5" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -1002,6 +1016,12 @@ version = "7.1.1" deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +[[deps.LinearSolve]] +deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" +version = "1.11.1" + [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" @@ -1012,10 +1032,10 @@ version = "0.3.6" uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "Requires", "SIMDDualNumbers", "SLEEFPirates", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "9e10579c154f785b911d9ceb96c33fcc1a661171" +deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.99" +version = "0.12.101" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1030,16 +1050,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "56b0b7772676c499430dc8eb15cfab120c05a150" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.15.3" +version = "0.16.3" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "7bcc8323fb37523a6a51ade2234eee27a11114c8" +git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.1.3" +version = "0.2.1" [[deps.ManualMemory]] git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" @@ -1112,9 +1132,9 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "f755f36b19a5116bb580de457cda0c140153f283" +git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.6" +version = "0.3.7" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] @@ -1124,15 +1144,15 @@ version = "0.4.9" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "23b0e32fde256a4e2e497e678abcf956ed26204b" +git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.3" +version = "0.11.4" [[deps.NetCDF_jll]] deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "0cf4d1bf2ef45156aed85c9ac5f8c7e697d9288c" +git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.702.400+0" +version = "400.802.101+0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1145,9 +1165,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "8dc3be3e9edf976a3e79363b3bd2ad776a627c31" +git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.12" +version = "0.3.14" [[deps.Observables]] git-tree-sha1 = "fe29afdef3d0c4a8286128d4e45cc50621b1e43d" @@ -1162,9 +1182,9 @@ version = "1.10.8" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "7937eda4681660b4d6aeeecc2f7e1c81c8ee4e2f" +git-tree-sha1 = "887579a3eb005446d514ab7aeac5d1d027658b8f" uuid = "e7412a2a-1a6e-54c0-be00-318e2571c051" -version = "1.3.5+0" +version = "1.3.5+1" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] @@ -1188,9 +1208,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "15003dcb7d8db3c6c857fda14891a539a8f2705a" +git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.10+0" +version = "1.1.13+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1210,10 +1230,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "aab86872f5dccb1a6251ae7935b286e784dadba0" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "5.71.0" +version = "6.6.5" [[deps.PCRE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1241,9 +1261,9 @@ version = "0.4.2" [[deps.PaddedViews]] deps = ["OffsetArrays"] -git-tree-sha1 = "646eed6f6a5d8df6708f15ea7e02a7a2c4fe4800" +git-tree-sha1 = "03a7a85b76381a3d04c7a1656039197e70eda03d" uuid = "5432bcbf-9aad-5242-b902-cca2824c8663" -version = "0.5.10" +version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1259,9 +1279,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "d7fa6237da8004be601e19bd6666083056649918" +git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.1.3" +version = "2.2.1" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1281,27 +1301,27 @@ version = "0.1.1" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "e4fe0b50af3130ddd25e793b471cb43d5279e3e6" +git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.1" +version = "1.1.3" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] -git-tree-sha1 = "6c9fa3e4880242c666dafa4901a34d8e1cd1b243" +git-tree-sha1 = "ae6145ca68947569058866e443df69587acc1806" uuid = "7f904dfe-b85e-4ff6-b463-dae2292396a8" -version = "0.7.24" +version = "0.7.32" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "892b8d9dd3c7987a4d0fd320f0a421dd90b5d09d" +git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.5.4" +version = "0.6.3" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "a3ff99bf561183ee20386aec98ab8f4a12dc724a" +git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.2" +version = "0.1.3" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1316,21 +1336,21 @@ version = "1.4.0" [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "435379f01c1e6f7ca65cf46fdd403226f1d36e37" +git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.1" +version = "0.2.3" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "00cfd92944ca9c760982747e9a1d0d5d86ab1e5a" +git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.2" +version = "1.2.3" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] -git-tree-sha1 = "d940010be611ee9d67064fe559edbb305f8cc0eb" +git-tree-sha1 = "dfb54c4e414caa595a1f2ed759b160f5a3ddcba5" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "1.2.3" +version = "1.3.1" [[deps.Printf]] deps = ["Unicode"] @@ -1342,6 +1362,12 @@ git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.7.1" +[[deps.QOI]] +deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] +git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" +uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" +version = "1.0.0" + [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] git-tree-sha1 = "78aadffb3efd2155af139781b8a8df1ef279ea39" @@ -1368,16 +1394,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "c944fa4adbb47be43376359811c0a14757bdc8a8" +deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.20.0" +version = "2.24.1" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "b7edd69c796b30985ea6dfeda8504cdb7cf77e9f" +git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.5" +version = "0.2.9" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1392,9 +1418,9 @@ version = "0.1.3" [[deps.Requires]] deps = ["UUIDs"] -git-tree-sha1 = "8f82019e525f4d5c669692772a6f4b0a58b06a6a" +git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.2.0" +version = "1.3.0" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] @@ -1412,9 +1438,9 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "9ba33637b24341aba594a2783a502760aa0bff04" +git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.3.1" +version = "3.4.0" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] @@ -1441,9 +1467,9 @@ version = "0.3.0" [[deps.SciMLBase]] deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "6f3c31990f63ac67ff6a485ccf77c5d8f7257547" +git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.23.1" +version = "1.26.1" [[deps.Scratch]] deps = ["Dates"] @@ -1453,9 +1479,9 @@ version = "1.1.0" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "244586bc07462d22aed0113af9c731f2a518c93e" +git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.10" +version = "1.3.11" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1488,6 +1514,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.Sixel]] +deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] +git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" +uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" +version = "0.1.2" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1503,15 +1535,15 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "f33a0f6721b270cdf417f0c986e93c973e5913c8" +git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.19.1" +version = "1.20.0" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e08890d19787ec25029113e88c34ec20cac1c91e" +git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.0.0" +version = "2.1.0" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1527,30 +1559,30 @@ version = "0.4.1" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "3c76dde64d03699e074ac02eb2e8ba8254d428da" +git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.2.13" +version = "1.3.3" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "0f2aa8e32d511f758a2ce49208181f7733a0936a" +git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.1.0" +version = "1.2.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "2bb0cb32026a66037360606510fca5984ccc6b75" +git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.13" +version = "0.33.14" [[deps.StatsFuns]] deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "bedb3e17cc1d94ce0e6e66d3afa47157978ba404" +git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.14" +version = "0.9.15" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] @@ -1560,14 +1592,18 @@ version = "0.2.9" [[deps.StructArrays]] deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "2ce41e0d042c60ecd131e9fb7154a3bfadbf50d3" +git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.3" +version = "0.6.4" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[deps.SuiteSparse_jll]] +deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" + [[deps.TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1600,15 +1636,15 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "03013c6ae7f1824131b2ae2fc1d49793b51e8394" +git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.6" +version = "0.4.7" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "c342ae2abf4902d65a0b0bf59b28506a6e17078a" +git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.2" +version = "0.5.3" [[deps.TranscodingStreams]] deps = ["Random", "Test"] @@ -1624,9 +1660,9 @@ version = "0.3.0" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "ec9a310324dd2c546c07f33a599ded9c1d00a420" +git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.8" +version = "0.1.9" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1648,15 +1684,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "0992ed0c3ef66b0390e5752fe60054e5ff93b908" +git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.9.2" +version = "1.10.1" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "17e5847bb36730d90801170ecd0ce4041a3dde86" +git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.22" +version = "0.21.24" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1774,11 +1810,17 @@ git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" version = "1.6.38+0" +[[deps.libsixel_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "78736dab31ae7a53540a6b752efc61f77b304c5b" +uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" +version = "1.8.6+1" + [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "c45f4e40e7aafe9d086379e5578947ec8b95a8fb" +git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+0" +version = "1.3.7+1" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] diff --git a/examples/basics/solid_body_rotation.jl b/examples/basics/solid_body_rotation.jl index ed41a728..ca32d213 100644 --- a/examples/basics/solid_body_rotation.jl +++ b/examples/basics/solid_body_rotation.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.3 +# v0.17.7 using Markdown using InteractiveUtils @@ -208,6 +208,7 @@ begin end end + # ╔═║ 00000000-0000-0000-0000-000000000001 PLUTO_PROJECT_TOML_CONTENTS = """ [deps] @@ -218,11 +219,11 @@ MeshArrays = "cb8c808f-1acf-59a3-9d2b-6e38d009f683" PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" [compat] -CairoMakie = "~0.6.6" -DataFrames = "~1.3.0" -IndividualDisplacements = "~0.3.4" -MeshArrays = "~0.2.30" -PlutoUI = "~0.7.24" +CairoMakie = "~0.7.2" +DataFrames = "~1.3.2" +IndividualDisplacements = "~0.3.8" +MeshArrays = "~0.2.31" +PlutoUI = "~0.7.32" """ # ╔═║ 00000000-0000-0000-0000-000000000002 @@ -233,16 +234,16 @@ julia_version = "1.7.0" manifest_format = "2.0" [[deps.AbstractFFTs]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0" +deps = ["ChainRulesCore", "LinearAlgebra"] +git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.0.1" +version = "1.1.0" [[deps.AbstractPlutoDingetjes]] deps = ["Pkg"] -git-tree-sha1 = "abb72771fd8895a7ebd83d5632dc4b989b022b5b" +git-tree-sha1 = "8eaf9f1b4921132a4cff3f36a1d9ba923b14a481" uuid = "6e696c72-6542-2067-7265-42206c756150" -version = "1.1.2" +version = "1.1.4" [[deps.AbstractTrees]] git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" @@ -251,9 +252,9 @@ version = "0.3.4" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "84918055d15b3114ede17ac6a7182f68870c16f7" +git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.1" +version = "3.3.3" [[deps.Animations]] deps = ["Colors"] @@ -272,9 +273,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "265b06e2b1f6a216e0e8f183d28e4d354eab3220" +git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.1" +version = "3.2.2" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -296,9 +297,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "bc1317f71de8dce26ea67fcdf7eccc0d0693b75b" +git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.1" +version = "0.1.2" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -319,15 +320,15 @@ version = "0.1.1" [[deps.CPUSummary]] deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "87b0c9c6ee0124d6c1f4ce8cb035dcaf9f90b803" +git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.6" +version = "0.1.7" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "49f14b6c56a2da47608fe30aed711b5882264d7a" +git-tree-sha1 = "9519274b50500b8029973d241d32cfbf0b127d97" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.9.11" +version = "0.10.2" [[deps.Cairo]] deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"] @@ -337,15 +338,15 @@ version = "1.0.5" [[deps.CairoMakie]] deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "774ff1cce3ae930af3948c120c15eeb96c886c33" +git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.6.6" +version = "0.7.2" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "f2202b55d816427cd385a9a4f3ffb226bee80f99" +git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" -version = "1.16.1+0" +version = "1.16.1+1" [[deps.CatViews]] deps = ["Random", "Test"] @@ -355,9 +356,9 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "4c26b4e9e91ca528ea212927326ece5918a04b47" +git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.11.2" +version = "1.12.0" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] @@ -385,9 +386,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "a851fec56cb73cfdf43762999ec72eff5b86882a" +git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.15.0" +version = "3.16.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -441,9 +442,9 @@ uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.5.7" [[deps.Crayons]] -git-tree-sha1 = "3f71217b538d7aaee0b69ab47d9b7724ca8afa0d" +git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" -version = "4.0.4" +version = "4.1.1" [[deps.CyclicArrays]] git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" @@ -463,9 +464,9 @@ version = "1.9.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "2e993336a3f68216be91eb8ee4625ebbaba19147" +git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.0" +version = "1.3.2" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -494,9 +495,9 @@ version = "0.4.0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "976a9d34dff2f2bad494cec64c32d54168db21b2" +git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.77.1" +version = "6.81.3" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -505,15 +506,15 @@ uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" version = "1.0.3" [[deps.DiffRules]] -deps = ["LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "9bc5dac3c8b6706b58ad5ce24cffd9861f07c94f" +deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] +git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.0" +version = "1.9.1" [[deps.DiskArrays]] -git-tree-sha1 = "6a50d800025a1664c99a8e819e0568c75e3ac0c7" +git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.2.12" +version = "0.3.0" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -527,9 +528,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "c1724611e6ae29c6094c8d9850e3136297ba7fff" +git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.36" +version = "0.25.42" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -549,9 +550,9 @@ version = "2.2.3+0" [[deps.EllipsisNotation]] deps = ["ArrayInterface"] -git-tree-sha1 = "3fe985505b4b667e1ae303c9ca64d181f09d5c05" +git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.1.3" +version = "1.3.0" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -561,9 +562,9 @@ version = "2.2.10+0" [[deps.ExponentialUtilities]] deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "1b873816d2cfc8c0fcb1edcb08e67fdf630a70b7" +git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.10.2" +version = "1.11.0" [[deps.FFMPEG]] deps = ["FFMPEG_jll"] @@ -591,9 +592,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "e32a81c505ab234c992ca978f31ed8b0dabbc327" +git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.11" +version = "0.1.12" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -602,9 +603,9 @@ version = "0.3.2" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "2db648b6712831ecb333eae76dbfd1c156ca13bb" +git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.11.2" +version = "1.12.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -620,9 +621,9 @@ version = "0.12.7" [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "8b3c09b56acaf3c0e581c66638b85c8650ee9dca" +git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.8.1" +version = "2.10.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -644,9 +645,9 @@ version = "0.4.2" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "2b72a5624e289ee18256111657663721d59c143e" +git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.24" +version = "0.10.25" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -695,9 +696,9 @@ version = "0.21.0+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "74ef6288d071f58033d54fd6708d4bc23a8b8972" +git-tree-sha1 = "a32d672ac2c967f3deb8a81d828afc739c838a06" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.68.3+1" +version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -712,10 +713,10 @@ uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472" version = "1.3.14+0" [[deps.Graphs]] -deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "92243c07e786ea3458532e199eb3feee0e7e08eb" +deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] +git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.4.1" +version = "1.5.1" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] @@ -730,9 +731,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "fd83fa0bde42e01952757f01149dd968c06c4dba" +git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.0+1" +version = "1.12.1+0" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -742,9 +743,9 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "8f0dc80088981ab55702b04bba38097a44a1a3a9" +git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.5" +version = "0.1.6" [[deps.Hwloc]] deps = ["Hwloc_jll"] @@ -754,9 +755,9 @@ version = "2.0.0" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "3395d4d4aeb3c9d31f5929d32760d8baeee88aaf" +git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.5.0+0" +version = "2.7.0+0" [[deps.Hyperscript]] deps = ["Test"] @@ -787,10 +788,10 @@ uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" version = "0.9.3" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "TiffImages", "UUIDs"] -git-tree-sha1 = "a2951c93684551467265e0e32b577914f69532be" +deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.5.9" +version = "0.6.0" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -804,10 +805,10 @@ uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959" version = "1.0.0" [[deps.IndividualDisplacements]] -deps = ["CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "44e2c7267ff299fa4c8de4abf3f7cfb7d36eb402" +deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] +git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.4" +version = "0.3.8" [[deps.Inflate]] git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" @@ -816,9 +817,9 @@ version = "0.1.2" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "8d70835a3759cdd75881426fced1508bb7b7e1b6" +git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.1" +version = "1.1.2" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -882,9 +883,9 @@ version = "1.0.0" [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "642a199af8b68253517b80bd3bfd17eb4e84df6e" +git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.3.0" +version = "1.4.0" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] @@ -892,12 +893,30 @@ git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.2" +[[deps.KLU]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] +git-tree-sha1 = "1ed18ccf6292d89abf85beba35b9399aeddff9b2" +uuid = "ef3ab10e-7fda-4108-b977-705223b18434" +version = "0.2.3" + [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] git-tree-sha1 = "591e8dc09ad18386189610acafb970032c519707" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" version = "0.6.3" +[[deps.Krylov]] +deps = ["LinearAlgebra", "Printf", "SparseArrays"] +git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" +version = "0.7.11" + +[[deps.KrylovKit]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" +version = "0.5.3" + [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c" @@ -917,15 +936,15 @@ version = "1.3.0" [[deps.LabelledArrays]] deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "3609bbf5feba7b22fb35fe7cb207c8c8d2e2fc5b" +git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.6.7" +version = "1.7.0" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "83b56449c39342a47f3fcdb3bc782bd6d66e1d97" +git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.4" +version = "0.1.5" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -996,6 +1015,12 @@ version = "7.1.1" deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +[[deps.LinearSolve]] +deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" +version = "1.11.1" + [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" @@ -1006,10 +1031,10 @@ version = "0.3.6" uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "Requires", "SIMDDualNumbers", "SLEEFPirates", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "9e10579c154f785b911d9ceb96c33fcc1a661171" +deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.99" +version = "0.12.101" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1024,16 +1049,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "56b0b7772676c499430dc8eb15cfab120c05a150" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.15.3" +version = "0.16.3" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "7bcc8323fb37523a6a51ade2234eee27a11114c8" +git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.1.3" +version = "0.2.1" [[deps.ManualMemory]] git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" @@ -1065,10 +1090,10 @@ deps = ["Artifacts", "Libdl"] uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" [[deps.MeshArrays]] -deps = ["CatViews", "Dates", "LazyArtifacts", "NearestNeighbors", "Pkg", "Printf", "SparseArrays", "Statistics", "Unitful"] -git-tree-sha1 = "16e380436a558bb4db8bf8ce493df7101feca661" +deps = ["CatViews", "Dates", "Downloads", "LazyArtifacts", "NearestNeighbors", "Pkg", "Printf", "SparseArrays", "Statistics", "Unitful"] +git-tree-sha1 = "c5b9b98540a900934d9b531f8a153ce49016cec7" uuid = "cb8c808f-1acf-59a3-9d2b-6e38d009f683" -version = "0.2.30" +version = "0.2.31" [[deps.Missings]] deps = ["DataAPI"] @@ -1106,9 +1131,9 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "f755f36b19a5116bb580de457cda0c140153f283" +git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.6" +version = "0.3.7" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] @@ -1118,15 +1143,15 @@ version = "0.4.9" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "23b0e32fde256a4e2e497e678abcf956ed26204b" +git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.3" +version = "0.11.4" [[deps.NetCDF_jll]] deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "0cf4d1bf2ef45156aed85c9ac5f8c7e697d9288c" +git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.702.400+0" +version = "400.802.101+0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1139,9 +1164,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "8dc3be3e9edf976a3e79363b3bd2ad776a627c31" +git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.12" +version = "0.3.14" [[deps.Observables]] git-tree-sha1 = "fe29afdef3d0c4a8286128d4e45cc50621b1e43d" @@ -1156,9 +1181,9 @@ version = "1.10.8" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "7937eda4681660b4d6aeeecc2f7e1c81c8ee4e2f" +git-tree-sha1 = "887579a3eb005446d514ab7aeac5d1d027658b8f" uuid = "e7412a2a-1a6e-54c0-be00-318e2571c051" -version = "1.3.5+0" +version = "1.3.5+1" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] @@ -1182,9 +1207,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "15003dcb7d8db3c6c857fda14891a539a8f2705a" +git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.10+0" +version = "1.1.13+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1204,10 +1229,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "aab86872f5dccb1a6251ae7935b286e784dadba0" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "5.71.0" +version = "6.6.5" [[deps.PCRE_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1235,9 +1260,9 @@ version = "0.4.2" [[deps.PaddedViews]] deps = ["OffsetArrays"] -git-tree-sha1 = "646eed6f6a5d8df6708f15ea7e02a7a2c4fe4800" +git-tree-sha1 = "03a7a85b76381a3d04c7a1656039197e70eda03d" uuid = "5432bcbf-9aad-5242-b902-cca2824c8663" -version = "0.5.10" +version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1253,9 +1278,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "d7fa6237da8004be601e19bd6666083056649918" +git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.1.3" +version = "2.2.1" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1275,27 +1300,27 @@ version = "0.1.1" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "e4fe0b50af3130ddd25e793b471cb43d5279e3e6" +git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.1" +version = "1.1.3" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] -git-tree-sha1 = "6c9fa3e4880242c666dafa4901a34d8e1cd1b243" +git-tree-sha1 = "ae6145ca68947569058866e443df69587acc1806" uuid = "7f904dfe-b85e-4ff6-b463-dae2292396a8" -version = "0.7.24" +version = "0.7.32" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "892b8d9dd3c7987a4d0fd320f0a421dd90b5d09d" +git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.5.4" +version = "0.6.3" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "a3ff99bf561183ee20386aec98ab8f4a12dc724a" +git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.2" +version = "0.1.3" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1310,21 +1335,21 @@ version = "1.4.0" [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "435379f01c1e6f7ca65cf46fdd403226f1d36e37" +git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.1" +version = "0.2.3" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "00cfd92944ca9c760982747e9a1d0d5d86ab1e5a" +git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.2" +version = "1.2.3" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] -git-tree-sha1 = "d940010be611ee9d67064fe559edbb305f8cc0eb" +git-tree-sha1 = "dfb54c4e414caa595a1f2ed759b160f5a3ddcba5" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "1.2.3" +version = "1.3.1" [[deps.Printf]] deps = ["Unicode"] @@ -1336,6 +1361,12 @@ git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.7.1" +[[deps.QOI]] +deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] +git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" +uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" +version = "1.0.0" + [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] git-tree-sha1 = "78aadffb3efd2155af139781b8a8df1ef279ea39" @@ -1362,16 +1393,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "c944fa4adbb47be43376359811c0a14757bdc8a8" +deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.20.0" +version = "2.24.1" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "b7edd69c796b30985ea6dfeda8504cdb7cf77e9f" +git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.5" +version = "0.2.9" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1386,9 +1417,9 @@ version = "0.1.3" [[deps.Requires]] deps = ["UUIDs"] -git-tree-sha1 = "8f82019e525f4d5c669692772a6f4b0a58b06a6a" +git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.2.0" +version = "1.3.0" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] @@ -1406,9 +1437,9 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "9ba33637b24341aba594a2783a502760aa0bff04" +git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.3.1" +version = "3.4.0" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] @@ -1435,9 +1466,9 @@ version = "0.3.0" [[deps.SciMLBase]] deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "6f3c31990f63ac67ff6a485ccf77c5d8f7257547" +git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.23.1" +version = "1.26.1" [[deps.Scratch]] deps = ["Dates"] @@ -1447,9 +1478,9 @@ version = "1.1.0" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "244586bc07462d22aed0113af9c731f2a518c93e" +git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.10" +version = "1.3.11" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1482,6 +1513,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.Sixel]] +deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] +git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" +uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" +version = "0.1.2" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1497,15 +1534,15 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "f33a0f6721b270cdf417f0c986e93c973e5913c8" +git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.19.1" +version = "1.20.0" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e08890d19787ec25029113e88c34ec20cac1c91e" +git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.0.0" +version = "2.1.0" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1521,30 +1558,30 @@ version = "0.4.1" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "3c76dde64d03699e074ac02eb2e8ba8254d428da" +git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.2.13" +version = "1.3.3" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "0f2aa8e32d511f758a2ce49208181f7733a0936a" +git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.1.0" +version = "1.2.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "2bb0cb32026a66037360606510fca5984ccc6b75" +git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.13" +version = "0.33.14" [[deps.StatsFuns]] deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "bedb3e17cc1d94ce0e6e66d3afa47157978ba404" +git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.14" +version = "0.9.15" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] @@ -1554,14 +1591,18 @@ version = "0.2.9" [[deps.StructArrays]] deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "2ce41e0d042c60ecd131e9fb7154a3bfadbf50d3" +git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.3" +version = "0.6.4" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[deps.SuiteSparse_jll]] +deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" + [[deps.TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1594,15 +1635,15 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "03013c6ae7f1824131b2ae2fc1d49793b51e8394" +git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.6" +version = "0.4.7" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "c342ae2abf4902d65a0b0bf59b28506a6e17078a" +git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.2" +version = "0.5.3" [[deps.TranscodingStreams]] deps = ["Random", "Test"] @@ -1618,9 +1659,9 @@ version = "0.3.0" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "ec9a310324dd2c546c07f33a599ded9c1d00a420" +git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.8" +version = "0.1.9" [[deps.UUIDs]] deps = ["Random", "SHA"] @@ -1642,15 +1683,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "0992ed0c3ef66b0390e5752fe60054e5ff93b908" +git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.9.2" +version = "1.10.1" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "17e5847bb36730d90801170ecd0ce4041a3dde86" +git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.22" +version = "0.21.24" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1768,11 +1809,17 @@ git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" version = "1.6.38+0" +[[deps.libsixel_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "78736dab31ae7a53540a6b752efc61f77b304c5b" +uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" +version = "1.8.6+1" + [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "c45f4e40e7aafe9d086379e5578947ec8b95a8fb" +git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+0" +version = "1.3.7+1" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] diff --git a/examples/worldwide/global_ocean_circulation.jl b/examples/worldwide/global_ocean_circulation.jl index d67f987e..819ffb45 100644 --- a/examples/worldwide/global_ocean_circulation.jl +++ b/examples/worldwide/global_ocean_circulation.jl @@ -457,10 +457,10 @@ PlutoUI = "7f904dfe-b85e-4ff6-b463-dae2292396a8" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [compat] -IndividualDisplacements = "~0.3.7" +IndividualDisplacements = "~0.3.8" MITgcmTools = "~0.2.1" OceanStateEstimation = "~0.2.0" -Plots = "~1.25.6" +Plots = "~1.25.7" PlutoUI = "~0.7.32" """ @@ -512,9 +512,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "bc1317f71de8dce26ea67fcdf7eccc0d0693b75b" +git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.1" +version = "0.1.2" [[deps.Blosc]] deps = ["Blosc_jll"] @@ -542,9 +542,9 @@ version = "0.1.1" [[deps.CPUSummary]] deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "87b0c9c6ee0124d6c1f4ce8cb035dcaf9f90b803" +git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.6" +version = "0.1.7" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] @@ -566,9 +566,9 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "54fc4400de6e5c3e27be6047da2ef6ba355511f8" +git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.11.6" +version = "1.12.0" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] @@ -699,9 +699,9 @@ version = "0.4.0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "267a78994dacb3ade0da2bf8907c1d824ae3b668" +git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.81.1" +version = "6.81.3" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -710,10 +710,10 @@ uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" version = "1.0.3" [[deps.DiffRules]] -deps = ["LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "9bc5dac3c8b6706b58ad5ce24cffd9861f07c94f" +deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] +git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.0" +version = "1.9.1" [[deps.DiskArrays]] git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" @@ -732,9 +732,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "5863b0b10512ed4add2b5ec07e335dc6121065a5" +git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.41" +version = "0.25.42" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -939,9 +939,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "fd83fa0bde42e01952757f01149dd968c06c4dba" +git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.0+1" +version = "1.12.1+0" [[deps.HTTP]] deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"] @@ -957,9 +957,9 @@ version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "8f0dc80088981ab55702b04bba38097a44a1a3a9" +git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.5" +version = "0.1.6" [[deps.Hwloc]] deps = ["Hwloc_jll"] @@ -997,9 +997,9 @@ version = "0.1.1" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "71875f15ab79aa2544eaef439bef9839248e1c3f" +git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.7" +version = "0.3.8" [[deps.Inflate]] git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" @@ -1014,9 +1014,9 @@ version = "0.5.0" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "8d70835a3759cdd75881426fced1508bb7b7e1b6" +git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.1" +version = "1.1.2" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -1126,9 +1126,9 @@ version = "0.15.9" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "83b56449c39342a47f3fcdb3bc782bd6d66e1d97" +git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.4" +version = "0.1.5" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -1213,9 +1213,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] -git-tree-sha1 = "c954090c0a7327a52beccf984610cd505b18d6ce" +git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.11.0" +version = "1.11.1" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] @@ -1316,9 +1316,9 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "f755f36b19a5116bb580de457cda0c140153f283" +git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.6" +version = "0.3.7" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] @@ -1334,9 +1334,9 @@ version = "0.11.4" [[deps.NetCDF_jll]] deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "0cf4d1bf2ef45156aed85c9ac5f8c7e697d9288c" +git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.702.400+0" +version = "400.802.101+0" [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" @@ -1398,9 +1398,9 @@ version = "1.4.1" [[deps.OrdinaryDiffEq]] deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "d49b5ab8f44ceed4b896fca8a92ea198c2eeda9a" +git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.6.2" +version = "6.6.5" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1426,9 +1426,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "92f91ba9e5941fc781fecf5494ac1da87bdac775" +git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.2.0" +version = "2.2.1" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1454,9 +1454,9 @@ version = "1.1.3" [[deps.Plots]] deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "GeometryBasics", "JSON", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "db7393a80d0e5bef70f2b518990835541917a544" +git-tree-sha1 = "7e4920a7d4323b8ffc3db184580598450bde8a8e" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.25.6" +version = "1.25.7" [[deps.PlutoUI]] deps = ["AbstractPlutoDingetjes", "Base64", "ColorTypes", "Dates", "Hyperscript", "HypertextLiteral", "IOCapture", "InteractiveUtils", "JSON", "Logging", "Markdown", "Random", "Reexport", "UUIDs"] @@ -1472,9 +1472,9 @@ version = "0.6.3" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "a3ff99bf561183ee20386aec98ab8f4a12dc724a" +git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.2" +version = "0.1.3" [[deps.PooledArrays]] deps = ["DataAPI", "Future"] @@ -1543,9 +1543,9 @@ version = "2.24.1" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "832379c5df67f4bab32ed0253ac299cf1e9c36e6" +git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.8" +version = "0.2.9" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1603,9 +1603,9 @@ version = "0.6.28" [[deps.SciMLBase]] deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "40c1c606543c0130cd3673f0dd9e11f2b5d76cd0" +git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.26.0" +version = "1.26.1" [[deps.Scratch]] deps = ["Dates"] @@ -1671,9 +1671,9 @@ version = "1.20.0" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e08890d19787ec25029113e88c34ec20cac1c91e" +git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.0.0" +version = "2.1.0" [[deps.Static]] deps = ["IfElse"] @@ -1817,9 +1817,9 @@ version = "0.1.2" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "6e261bff5c9f2537776165dea3067df9de4440cf" +git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.23" +version = "0.21.24" [[deps.VertexSafeGraphs]] deps = ["Graphs"] diff --git a/examples/worldwide/three_dimensional_ocean.jl b/examples/worldwide/three_dimensional_ocean.jl index ae3b6dcf..ab403109 100644 --- a/examples/worldwide/three_dimensional_ocean.jl +++ b/examples/worldwide/three_dimensional_ocean.jl @@ -1,5 +1,5 @@ ### A Pluto.jl notebook ### -# v0.17.3 +# v0.17.7 using Markdown using InteractiveUtils @@ -156,8 +156,8 @@ customπŸ”΄ = DataFrame(ID=Int[], fid=Int[], x=Float64[], y=Float64[], lon=Float64[], lat=Float64[], year=Float64[], col=Symbol[]) # ╔═║ c5eeb1f0-2c6f-4cd5-8a66-538da09c282d -function customπŸ”§(sol,𝑃::𝐹_MeshArray3D;id=missing,𝑇=missing) - df=postprocess_MeshArray(sol,𝑃,id=id,𝑇=𝑇) +function customπŸ”§(sol,𝑃::𝐹_MeshArray3D,𝐷::NamedTuple;id=missing,𝑇=missing) + df=postprocess_MeshArray(sol,𝑃,𝐷,id=id,𝑇=𝑇) add_lonlat!(df,𝐷.XC,𝐷.YC) #add year (convenience time axis for plotting) @@ -192,7 +192,7 @@ begin df=DataFrame(:z => fill(kk,nf),:f => fill(1,nf)) (df.x,df.y)=initial_positions(Ξ“, nf, lo, la) - 𝐼=Individuals(𝑃,df.x,df.y,df.z,df.f,(πŸ”΄=customπŸ”΄,πŸ”§=customπŸ”§)) + 𝐼=Individuals(𝑃,df.x,df.y,df.z,df.f,(πŸ”΄=customπŸ”΄,πŸ”§=customπŸ”§, 𝐷=𝐷)) end # ╔═║ 938fdaa8-357d-477e-8fa2-e6da53806242 @@ -241,11 +241,11 @@ NetCDF = "30363a11-5582-574a-97bb-aa9a979735b9" OceanStateEstimation = "891f6deb-a4f5-4bc5-a2e3-1e8f649cdd2c" [compat] -CairoMakie = "~0.6.6" -DataFrames = "~1.3.0" -IndividualDisplacements = "~0.3.5" +CairoMakie = "~0.7.2" +DataFrames = "~1.3.2" +IndividualDisplacements = "~0.3.8" MeshArrays = "~0.2.31" -NetCDF = "~0.11.3" +NetCDF = "~0.11.4" OceanStateEstimation = "~0.2.0" """ @@ -258,15 +258,15 @@ manifest_format = "2.0" [[deps.AWS]] deps = ["Base64", "Compat", "Dates", "Downloads", "GitHub", "HTTP", "IniFile", "JSON", "MbedTLS", "Mocking", "OrderedCollections", "Retry", "Sockets", "URIs", "UUIDs", "XMLDict"] -git-tree-sha1 = "82e9580aff0d2c1703f4bf38a9de79e927f252f9" +git-tree-sha1 = "07d944e4d9946c2061f97c1564d1b7ae8ea8f189" uuid = "fbe9abb3-538b-5e4e-ba9e-bc94f4f92ebc" -version = "1.74.0" +version = "1.61.0" [[deps.AbstractFFTs]] -deps = ["LinearAlgebra"] -git-tree-sha1 = "485ee0867925449198280d4af84bdb46a2a404d0" +deps = ["ChainRulesCore", "LinearAlgebra"] +git-tree-sha1 = "6f1d9bc1c08f9f4a8fa92e3ea3cb50153a1b40d4" uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c" -version = "1.0.1" +version = "1.1.0" [[deps.AbstractTrees]] git-tree-sha1 = "03e0550477d86222521d254b741d470ba17ea0b5" @@ -275,9 +275,9 @@ version = "0.3.4" [[deps.Adapt]] deps = ["LinearAlgebra"] -git-tree-sha1 = "84918055d15b3114ede17ac6a7182f68870c16f7" +git-tree-sha1 = "af92965fb30777147966f58acb05da51c5616b5f" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.3.1" +version = "3.3.3" [[deps.Animations]] deps = ["Colors"] @@ -296,9 +296,9 @@ version = "0.2.0" [[deps.ArrayInterface]] deps = ["Compat", "IfElse", "LinearAlgebra", "Requires", "SparseArrays", "Static"] -git-tree-sha1 = "265b06e2b1f6a216e0e8f183d28e4d354eab3220" +git-tree-sha1 = "1ee88c4c76caa995a885dc2f22a5d548dfbbc0ba" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "3.2.1" +version = "3.2.2" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -320,9 +320,9 @@ uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" [[deps.BitTwiddlingConvenienceFunctions]] deps = ["Static"] -git-tree-sha1 = "bc1317f71de8dce26ea67fcdf7eccc0d0693b75b" +git-tree-sha1 = "5e98d6a6aa92e5758c4d58501b7bf23732699fa3" uuid = "62783981-4cbd-42fc-bca8-16325de8dc4b" -version = "0.1.1" +version = "0.1.2" [[deps.Blosc]] deps = ["Blosc_jll"] @@ -338,9 +338,9 @@ version = "1.21.1+0" [[deps.Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "c3598e525718abcc440f69cc6d5f60dda0a1b61e" +git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" -version = "1.0.6+5" +version = "1.0.8+0" [[deps.CEnum]] git-tree-sha1 = "215a9aa4a1f23fbd05b92769fdd62559488d70e9" @@ -355,9 +355,9 @@ version = "0.1.1" [[deps.CPUSummary]] deps = ["Hwloc", "IfElse", "Static"] -git-tree-sha1 = "87b0c9c6ee0124d6c1f4ce8cb035dcaf9f90b803" +git-tree-sha1 = "ba19d1c8ff6b9c680015033c66802dd817a9cf39" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.6" +version = "0.1.7" [[deps.CSV]] deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] @@ -373,15 +373,15 @@ version = "1.0.5" [[deps.CairoMakie]] deps = ["Base64", "Cairo", "Colors", "FFTW", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "SHA", "StaticArrays"] -git-tree-sha1 = "774ff1cce3ae930af3948c120c15eeb96c886c33" +git-tree-sha1 = "90fe6622efbb627e7c962e9bd6f5c4228680b7ca" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" -version = "0.6.6" +version = "0.7.2" [[deps.Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "e2f47f6d8337369411569fd45ae5753ca10394c6" +git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" uuid = "83423d85-b0ee-5818-9007-b63ccbeb887a" -version = "1.16.0+6" +version = "1.16.1+1" [[deps.CatViews]] deps = ["Random", "Test"] @@ -391,9 +391,9 @@ version = "1.0.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "4c26b4e9e91ca528ea212927326ece5918a04b47" +git-tree-sha1 = "f9982ef575e19b0e5c7a98c6e75ee496c0f73a93" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.11.2" +version = "1.12.0" [[deps.ChangesOfVariables]] deps = ["ChainRulesCore", "LinearAlgebra", "Test"] @@ -403,9 +403,9 @@ version = "0.1.2" [[deps.ClimateModels]] deps = ["AWS", "CFTime", "CSV", "DataFrames", "Dates", "Downloads", "Git", "NetCDF", "OrderedCollections", "Pkg", "Statistics", "Suppressor", "TOML", "Test", "UUIDs", "Zarr"] -git-tree-sha1 = "15ba5b736e675d5e79fe5ad0e7a8f67a286ffe31" +git-tree-sha1 = "7e9ebc6da08f73d6fc16e7805245ec03b7efc3fd" uuid = "f6adb021-9183-4f40-84dc-8cea6f651bb0" -version = "0.1.20" +version = "0.2.2" [[deps.CloseOpenIntervals]] deps = ["ArrayInterface", "Static"] @@ -427,9 +427,9 @@ version = "0.4.0" [[deps.ColorSchemes]] deps = ["ColorTypes", "Colors", "FixedPointNumbers", "Random"] -git-tree-sha1 = "a851fec56cb73cfdf43762999ec72eff5b86882a" +git-tree-sha1 = "6b6f04f93710c71550ec7e16b650c1b9a612d0b6" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.15.0" +version = "3.16.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -483,9 +483,9 @@ uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.5.7" [[deps.Crayons]] -git-tree-sha1 = "3f71217b538d7aaee0b69ab47d9b7724ca8afa0d" +git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" -version = "4.0.4" +version = "4.1.1" [[deps.CyclicArrays]] git-tree-sha1 = "4ab3cb8563aceca605a543a19aacaf09c6781dd3" @@ -505,9 +505,9 @@ version = "1.9.0" [[deps.DataFrames]] deps = ["Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] -git-tree-sha1 = "2e993336a3f68216be91eb8ee4625ebbaba19147" +git-tree-sha1 = "ae02104e835f219b8930c7664b8012c93475c340" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" -version = "1.3.0" +version = "1.3.2" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -536,9 +536,9 @@ version = "0.4.0" [[deps.DiffEqBase]] deps = ["ArrayInterface", "ChainRulesCore", "DEDataArrays", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "IterativeSolvers", "LabelledArrays", "LinearAlgebra", "Logging", "MuladdMacro", "NonlinearSolve", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "StaticArrays", "Statistics", "SuiteSparse", "ZygoteRules"] -git-tree-sha1 = "976a9d34dff2f2bad494cec64c32d54168db21b2" +git-tree-sha1 = "d75333ab19d6d01c53bb350a9aabb074ba768a9d" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.77.1" +version = "6.81.3" [[deps.DiffResults]] deps = ["StaticArrays"] @@ -547,15 +547,15 @@ uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" version = "1.0.3" [[deps.DiffRules]] -deps = ["LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "9bc5dac3c8b6706b58ad5ce24cffd9861f07c94f" +deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] +git-tree-sha1 = "84083a5136b6abf426174a58325ffd159dd6d94f" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.9.0" +version = "1.9.1" [[deps.DiskArrays]] -git-tree-sha1 = "6a50d800025a1664c99a8e819e0568c75e3ac0c7" +git-tree-sha1 = "eea012149f3aaae4663da3b686f493fa4afad7ad" uuid = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3" -version = "0.2.12" +version = "0.3.0" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -569,9 +569,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "c1724611e6ae29c6094c8d9850e3136297ba7fff" +git-tree-sha1 = "0c8693f37a265b6c0e552861cad8bf4b13d65686" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.36" +version = "0.25.42" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -591,9 +591,9 @@ version = "2.2.3+0" [[deps.EllipsisNotation]] deps = ["ArrayInterface"] -git-tree-sha1 = "3fe985505b4b667e1ae303c9ca64d181f09d5c05" +git-tree-sha1 = "d7ab55febfd0907b285fbf8dc0c73c0825d9d6aa" uuid = "da5c29d0-fa7d-589e-88eb-ea29b0a81949" -version = "1.1.3" +version = "1.3.0" [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -603,14 +603,14 @@ version = "2.2.10+0" [[deps.ExponentialUtilities]] deps = ["ArrayInterface", "LinearAlgebra", "Printf", "Requires", "SparseArrays"] -git-tree-sha1 = "1b873816d2cfc8c0fcb1edcb08e67fdf630a70b7" +git-tree-sha1 = "3e1289d9a6a54791c1ee60da0850f4fd71188da6" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.10.2" +version = "1.11.0" [[deps.ExprTools]] -git-tree-sha1 = "b7e3d17636b348f005f11040025ae8c6f645fe92" +git-tree-sha1 = "56559bbef6ca5ea0c0818fa5c90320398a6fbf8d" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" -version = "0.1.6" +version = "0.1.8" [[deps.EzXML]] deps = ["Printf", "XML2_jll"] @@ -625,10 +625,10 @@ uuid = "c87230d0-a227-11e9-1b43-d7ebe4e7570a" version = "0.4.1" [[deps.FFMPEG_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "LibVPX_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] -git-tree-sha1 = "3cc57ad0a213808473eafef4845a74766242e05f" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "LAME_jll", "Libdl", "Ogg_jll", "OpenSSL_jll", "Opus_jll", "Pkg", "Zlib_jll", "libass_jll", "libfdk_aac_jll", "libvorbis_jll", "x264_jll", "x265_jll"] +git-tree-sha1 = "d8a578692e3077ac998b50c0217dfd67f21d1e5f" uuid = "b22a6f82-2f65-5046-a5b2-351ab43fb4e5" -version = "4.3.1+4" +version = "4.4.0+0" [[deps.FFTW]] deps = ["AbstractFFTs", "FFTW_jll", "LinearAlgebra", "MKL_jll", "Preferences", "Reexport"] @@ -644,9 +644,9 @@ version = "3.3.10+0" [[deps.FastBroadcast]] deps = ["LinearAlgebra", "Polyester", "Static"] -git-tree-sha1 = "e32a81c505ab234c992ca978f31ed8b0dabbc327" +git-tree-sha1 = "0f8ef5dcb040dbb9edd98b1763ac10882ee1ff03" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.1.11" +version = "0.1.12" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -655,9 +655,9 @@ version = "0.3.2" [[deps.FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "2db648b6712831ecb333eae76dbfd1c156ca13bb" +git-tree-sha1 = "67551df041955cc6ee2ed098718c8fcd7fc7aebe" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.11.2" +version = "1.12.0" [[deps.FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -673,9 +673,9 @@ version = "0.12.7" [[deps.FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "8b3c09b56acaf3c0e581c66638b85c8650ee9dca" +git-tree-sha1 = "6eae72e9943d8992d14359c32aed5f892bda1569" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.8.1" +version = "2.10.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -685,9 +685,9 @@ version = "0.8.4" [[deps.Fontconfig_jll]] deps = ["Artifacts", "Bzip2_jll", "Expat_jll", "FreeType2_jll", "JLLWrappers", "Libdl", "Libuuid_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "35895cf184ceaab11fd778b4590144034a167a2f" +git-tree-sha1 = "21efd19106a55620a188615da6d3d06cd7f6ee03" uuid = "a3f928ae-7b40-5064-980b-68af3947d34b" -version = "2.13.1+14" +version = "2.13.93+0" [[deps.Formatting]] deps = ["Printf"] @@ -702,9 +702,9 @@ version = "0.6.0" [[deps.ForwardDiff]] deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "LinearAlgebra", "LogExpFunctions", "NaNMath", "Preferences", "Printf", "Random", "SpecialFunctions", "StaticArrays"] -git-tree-sha1 = "2b72a5624e289ee18256111657663721d59c143e" +git-tree-sha1 = "1bd6fc0c344fc0cbee1f42f8d2e7ec8253dda2d2" uuid = "f6369f11-7733-5829-9624-2563aa707210" -version = "0.10.24" +version = "0.10.25" [[deps.FreeType]] deps = ["CEnum", "FreeType2_jll"] @@ -714,9 +714,9 @@ version = "4.0.0" [[deps.FreeType2_jll]] deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "cbd58c9deb1d304f5a245a0b7eb841a2560cfec6" +git-tree-sha1 = "87eb71354d8ec1a96d4a7636bd57a7347dde3ef9" uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7" -version = "2.10.1+5" +version = "2.10.4+0" [[deps.FreeTypeAbstraction]] deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics", "StaticArrays"] @@ -746,10 +746,10 @@ uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326" version = "0.4.1" [[deps.Gettext_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] -git-tree-sha1 = "8c14294a079216000a0bdca5ec5a447f073ddc9d" +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] +git-tree-sha1 = "9b02998aba7bf074d14de89f9d37ca24a1a0b046" uuid = "78b55507-aeef-58d4-861c-77aaff3498b1" -version = "0.20.1+7" +version = "0.21.0+0" [[deps.Git]] deps = ["Git_jll"] @@ -758,22 +758,22 @@ uuid = "d7ba0133-e1db-5d97-8f8c-041e4b3a1eb2" version = "1.2.1" [[deps.GitHub]] -deps = ["Base64", "Dates", "HTTP", "JSON", "MbedTLS", "Sockets", "SodiumSeal"] -git-tree-sha1 = "c8594dff1ed76e232d8063b2a2555335900af6f3" +deps = ["Base64", "Dates", "HTTP", "JSON", "MbedTLS", "Sockets", "SodiumSeal", "URIs"] +git-tree-sha1 = "056781ae7b953289778408b136f8708a46837979" uuid = "bc5e4493-9b4d-5f90-b8aa-2b2bcaad7a26" -version = "5.7.0" +version = "5.7.2" [[deps.Git_jll]] deps = ["Artifacts", "Expat_jll", "Gettext_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "33be385f3432a5a5b7f6965af9592d4407f3167f" +git-tree-sha1 = "6e93d42b97978709e9c941fa43d0f01701f0d290" uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb" -version = "2.31.0+0" +version = "2.34.1+0" [[deps.Glib_jll]] deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "04690cc5008b38ecbdfede949220bc7d9ba26397" +git-tree-sha1 = "a32d672ac2c967f3deb8a81d828afc739c838a06" uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" -version = "2.59.0+4" +version = "2.68.3+2" [[deps.Graphics]] deps = ["Colors", "LinearAlgebra", "NaNMath"] @@ -788,10 +788,10 @@ uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472" version = "1.3.14+0" [[deps.Graphs]] -deps = ["ArnoldiMethod", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] -git-tree-sha1 = "92243c07e786ea3458532e199eb3feee0e7e08eb" +deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"] +git-tree-sha1 = "d727758173afef0af878b29ac364a0eca299fc6b" uuid = "86223c79-3864-5bf0-83f7-82e725a168b6" -version = "1.4.1" +version = "1.5.1" [[deps.GridLayoutBase]] deps = ["GeometryBasics", "InteractiveUtils", "Observables"] @@ -806,9 +806,9 @@ version = "1.0.2" [[deps.HDF5_jll]] deps = ["Artifacts", "JLLWrappers", "LibCURL_jll", "Libdl", "OpenSSL_jll", "Pkg", "Zlib_jll"] -git-tree-sha1 = "fd83fa0bde42e01952757f01149dd968c06c4dba" +git-tree-sha1 = "bab67c0d1c4662d2c4be8c6007751b0b6111de5c" uuid = "0234f1f7-429e-5d53-9886-15a909be8d59" -version = "1.12.0+1" +version = "1.12.1+0" [[deps.HTTP]] deps = ["Base64", "Dates", "IniFile", "Logging", "MbedTLS", "NetworkOptions", "Sockets", "URIs"] @@ -817,16 +817,16 @@ uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" version = "0.9.17" [[deps.HarfBuzz_jll]] -deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Gettext_jll", "Glib_jll", "Graphite2_jll", "ICU_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] -git-tree-sha1 = "90bed5fc61d12d10832ebf988988104888eebaca" +deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] +git-tree-sha1 = "129acf094d168394e80ee1dc4bc06ec835e510a3" uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" -version = "2.6.1+10" +version = "2.8.1+1" [[deps.HostCPUFeatures]] deps = ["BitTwiddlingConvenienceFunctions", "IfElse", "Libdl", "Static"] -git-tree-sha1 = "8f0dc80088981ab55702b04bba38097a44a1a3a9" +git-tree-sha1 = "3965a3216446a6b020f0d48f1ba94ef9ec01720d" uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" -version = "0.1.5" +version = "0.1.6" [[deps.Hwloc]] deps = ["Hwloc_jll"] @@ -836,15 +836,9 @@ version = "2.0.0" [[deps.Hwloc_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "3395d4d4aeb3c9d31f5929d32760d8baeee88aaf" +git-tree-sha1 = "d8bccde6fc8300703673ef9e1383b11403ac1313" uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8" -version = "2.5.0+0" - -[[deps.ICU_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6ce9cf3c5490b045710d60ac3fd2fe48188846b3" -uuid = "a51ab1cf-af8e-5615-a023-bc2c838bba6b" -version = "67.1.0+3" +version = "2.7.0+0" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -858,10 +852,10 @@ uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534" version = "0.9.3" [[deps.ImageIO]] -deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "TiffImages", "UUIDs"] -git-tree-sha1 = "a2951c93684551467265e0e32b577914f69532be" +deps = ["FileIO", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs"] +git-tree-sha1 = "816fc866edd8307a6e79a575e6585bfab8cef27f" uuid = "82e4d734-157c-48bb-816b-45c225c6df19" -version = "0.5.9" +version = "0.6.0" [[deps.Imath_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -876,9 +870,9 @@ version = "1.0.0" [[deps.IndividualDisplacements]] deps = ["Artifacts", "CFTime", "CSV", "CyclicArrays", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrdinaryDiffEq", "Random", "UnPack"] -git-tree-sha1 = "580636fff0fe9a0d024f24c8b72e15fd684aeaa3" +git-tree-sha1 = "29a4b69ea96521d4909547f9344c0691a515bf8e" uuid = "b92f0c32-5b7e-11e9-1d7b-238b2da8b0e6" -version = "0.3.5" +version = "0.3.8" [[deps.Inflate]] git-tree-sha1 = "f5fc07d4e706b84f72d54eedcc1c13d92fb0871c" @@ -893,9 +887,9 @@ version = "0.5.0" [[deps.InlineStrings]] deps = ["Parsers"] -git-tree-sha1 = "8d70835a3759cdd75881426fced1508bb7b7e1b6" +git-tree-sha1 = "61feba885fac3a407465726d0c330b3055df897f" uuid = "842dd82b-1e85-43dc-bf29-5d0ee9dffc48" -version = "1.1.1" +version = "1.1.2" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -959,9 +953,9 @@ version = "1.0.0" [[deps.JLLWrappers]] deps = ["Preferences"] -git-tree-sha1 = "642a199af8b68253517b80bd3bfd17eb4e84df6e" +git-tree-sha1 = "22df5b96feef82434b07327e2d3c770a9b21e023" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" -version = "1.3.0" +version = "1.4.0" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] @@ -969,18 +963,41 @@ git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.2" +[[deps.KLU]] +deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] +git-tree-sha1 = "1ed18ccf6292d89abf85beba35b9399aeddff9b2" +uuid = "ef3ab10e-7fda-4108-b977-705223b18434" +version = "0.2.3" + [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] git-tree-sha1 = "591e8dc09ad18386189610acafb970032c519707" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" version = "0.6.3" +[[deps.Krylov]] +deps = ["LinearAlgebra", "Printf", "SparseArrays"] +git-tree-sha1 = "e60270d7871e7ffe66b3a90b477ecb5df037aa0c" +uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" +version = "0.7.11" + +[[deps.KrylovKit]] +deps = ["LinearAlgebra", "Printf"] +git-tree-sha1 = "0328ad9966ae29ccefb4e1b9bfd8c8867e4360df" +uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" +version = "0.5.3" + [[deps.LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "f6250b16881adf048549549fba48b1161acdac8c" uuid = "c1c5ebd0-6772-5130-a774-d5fcae4a789d" version = "3.100.1+0" +[[deps.LRUCache]] +git-tree-sha1 = "d64a0aff6691612ab9fb0117b0995270871c5dfc" +uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" +version = "1.3.0" + [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "e5b909bcf985c5e2605737d2ce278ed791b89be6" @@ -994,15 +1011,15 @@ version = "1.3.0" [[deps.LabelledArrays]] deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "MacroTools", "StaticArrays"] -git-tree-sha1 = "3609bbf5feba7b22fb35fe7cb207c8c8d2e2fc5b" +git-tree-sha1 = "41158dee1d434944570b02547d404e075da15690" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.6.7" +version = "1.7.0" [[deps.LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "83b56449c39342a47f3fcdb3bc782bd6d66e1d97" +git-tree-sha1 = "6dd77ee76188b0365f7d882d674b95796076fa2c" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.4" +version = "0.1.5" [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -1024,12 +1041,6 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433" deps = ["Artifacts", "Libdl", "MbedTLS_jll"] uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8" -[[deps.LibVPX_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "12ee7e23fa4d18361e7c2cde8f8337d4c3101bc7" -uuid = "dd192d2f-8180-539f-9fb4-cc70b1dcf69a" -version = "1.10.0+0" - [[deps.Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb" @@ -1079,6 +1090,12 @@ version = "7.1.1" deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" +[[deps.LinearSolve]] +deps = ["ArrayInterface", "DocStringExtensions", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "SuiteSparse", "UnPack"] +git-tree-sha1 = "a050cd5581a204eeda3ad13c1d2aabdc3c451b4e" +uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" +version = "1.11.1" + [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] git-tree-sha1 = "e5718a00af0ab9756305a0392832c8952c7426c1" @@ -1089,10 +1106,10 @@ version = "0.3.6" uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "Requires", "SIMDDualNumbers", "SLEEFPirates", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "9e10579c154f785b911d9ceb96c33fcc1a661171" +deps = ["ArrayInterface", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDDualNumbers", "SLEEFPirates", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "67c0dfeae307972b50009ce220aae5684ea852d1" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.99" +version = "0.12.101" [[deps.Lz4_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1102,9 +1119,9 @@ version = "1.9.3+0" [[deps.MITgcmTools]] deps = ["Artifacts", "ClimateModels", "DataFrames", "Dates", "LazyArtifacts", "MeshArrays", "NetCDF", "OrderedCollections", "Printf", "SparseArrays", "Suppressor", "UUIDs"] -git-tree-sha1 = "85fd18c07803b16af3e317e9568d526f5ca61853" +git-tree-sha1 = "bc351e1452ebffa346997f809e164815c73c1a67" uuid = "62725fbc-3a66-4df3-9000-e33e85b3a198" -version = "0.1.32" +version = "0.2.1" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1119,16 +1136,16 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.9" [[deps.Makie]] -deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] -git-tree-sha1 = "56b0b7772676c499430dc8eb15cfab120c05a150" +deps = ["Animations", "Base64", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Distributions", "DocStringExtensions", "FFMPEG", "FileIO", "FixedPointNumbers", "Formatting", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageIO", "IntervalSets", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MakieCore", "Markdown", "Match", "MathTeXEngine", "Observables", "OffsetArrays", "Packing", "PlotUtils", "PolygonOps", "Printf", "Random", "RelocatableFolders", "Serialization", "Showoff", "SignedDistanceFields", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "UnicodeFun"] +git-tree-sha1 = "0aafd5121c6e1b6a83bd3bb341da45f058225a9b" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" -version = "0.15.3" +version = "0.16.3" [[deps.MakieCore]] deps = ["Observables"] -git-tree-sha1 = "7bcc8323fb37523a6a51ade2234eee27a11114c8" +git-tree-sha1 = "c5fb1bfac781db766f9e4aef96adc19a729bc9b2" uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b" -version = "0.1.3" +version = "0.2.1" [[deps.ManualMemory]] git-tree-sha1 = "9cb207b18148b2199db259adfa923b45593fe08e" @@ -1213,9 +1230,9 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NaNMath]] -git-tree-sha1 = "f755f36b19a5116bb580de457cda0c140153f283" +git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "0.3.6" +version = "0.3.7" [[deps.NearestNeighbors]] deps = ["Distances", "StaticArrays"] @@ -1225,15 +1242,15 @@ version = "0.4.9" [[deps.NetCDF]] deps = ["DiskArrays", "Formatting", "NetCDF_jll"] -git-tree-sha1 = "23b0e32fde256a4e2e497e678abcf956ed26204b" +git-tree-sha1 = "8aca90c1a0f6c3bb65be11d307d8aad6b200087b" uuid = "30363a11-5582-574a-97bb-aa9a979735b9" -version = "0.11.3" +version = "0.11.4" [[deps.NetCDF_jll]] deps = ["Artifacts", "HDF5_jll", "JLLWrappers", "LibCURL_jll", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Pkg", "Zlib_jll", "nghttp2_jll"] -git-tree-sha1 = "0cf4d1bf2ef45156aed85c9ac5f8c7e697d9288c" +git-tree-sha1 = "03af9979e5f60b7ac42a428a5beb5282ffec45ca" uuid = "7243133f-43d8-5620-bbf4-c2c921802cf3" -version = "400.702.400+0" +version = "400.802.101+0" [[deps.Netpbm]] deps = ["FileIO", "ImageCore"] @@ -1246,9 +1263,9 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[deps.NonlinearSolve]] deps = ["ArrayInterface", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "8dc3be3e9edf976a3e79363b3bd2ad776a627c31" +git-tree-sha1 = "b61c51cd5b9d8b197dfcbbf2077a0a4e1505278d" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.12" +version = "0.3.14" [[deps.Observables]] git-tree-sha1 = "fe29afdef3d0c4a8286128d4e45cc50621b1e43d" @@ -1269,9 +1286,9 @@ version = "1.10.8" [[deps.Ogg_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "7937eda4681660b4d6aeeecc2f7e1c81c8ee4e2f" +git-tree-sha1 = "887579a3eb005446d514ab7aeac5d1d027658b8f" uuid = "e7412a2a-1a6e-54c0-be00-318e2571c051" -version = "1.3.5+0" +version = "1.3.5+1" [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] @@ -1295,9 +1312,9 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "15003dcb7d8db3c6c857fda14891a539a8f2705a" +git-tree-sha1 = "648107615c15d4e09f7eca16307bc821c1f718d8" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.10+0" +version = "1.1.13+0" [[deps.OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1317,10 +1334,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.4.1" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "aab86872f5dccb1a6251ae7935b286e784dadba0" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "RecursiveArrayTools", "Reexport", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "1475c25a9dc4de848a5234543f2cb8601ada67d4" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "5.71.0" +version = "6.6.5" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1352,15 +1369,15 @@ version = "0.4.2" [[deps.PaddedViews]] deps = ["OffsetArrays"] -git-tree-sha1 = "646eed6f6a5d8df6708f15ea7e02a7a2c4fe4800" +git-tree-sha1 = "03a7a85b76381a3d04c7a1656039197e70eda03d" uuid = "5432bcbf-9aad-5242-b902-cca2824c8663" -version = "0.5.10" +version = "0.5.11" [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9a336dee51d20d1ed890c4a8dca636e86e2b76ca" +git-tree-sha1 = "9bc1871464b12ed19297fbc56c4fb4ba84988b0d" uuid = "36c8627f-9965-5494-a995-c6b170f724f3" -version = "1.42.4+10" +version = "1.47.0+0" [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] @@ -1370,9 +1387,9 @@ version = "0.12.3" [[deps.Parsers]] deps = ["Dates"] -git-tree-sha1 = "d7fa6237da8004be601e19bd6666083056649918" +git-tree-sha1 = "0b5cfbb704034b5b4c1869e36634438a047df065" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.1.3" +version = "2.2.1" [[deps.Pixman_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1392,21 +1409,21 @@ version = "0.1.1" [[deps.PlotUtils]] deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "Statistics"] -git-tree-sha1 = "e4fe0b50af3130ddd25e793b471cb43d5279e3e6" +git-tree-sha1 = "6f1b25e8ea06279b5689263cc538f51331d7ca17" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.1.1" +version = "1.1.3" [[deps.Polyester]] deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "892b8d9dd3c7987a4d0fd320f0a421dd90b5d09d" +git-tree-sha1 = "55f5db122f19d8b5b26fe9576edc1ff819e499bb" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.5.4" +version = "0.6.3" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "a3ff99bf561183ee20386aec98ab8f4a12dc724a" +git-tree-sha1 = "0bc9e1a21ba066335a5207ac031ee41f72615181" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.2" +version = "0.1.3" [[deps.PolygonOps]] git-tree-sha1 = "77b3d3605fc1cd0b42d95eba87dfcd2bf67d5ff6" @@ -1421,21 +1438,21 @@ version = "1.4.0" [[deps.PreallocationTools]] deps = ["Adapt", "ArrayInterface", "ForwardDiff", "LabelledArrays"] -git-tree-sha1 = "435379f01c1e6f7ca65cf46fdd403226f1d36e37" +git-tree-sha1 = "e4cb8d4a2edf9b3804c1fb2c2de57d634ff3f36e" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.2.1" +version = "0.2.3" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "00cfd92944ca9c760982747e9a1d0d5d86ab1e5a" +git-tree-sha1 = "2cf929d64681236a2e074ffafb8d568733d2e6af" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.2.2" +version = "1.2.3" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "Markdown", "Reexport", "Tables"] -git-tree-sha1 = "d940010be611ee9d67064fe559edbb305f8cc0eb" +git-tree-sha1 = "dfb54c4e414caa595a1f2ed759b160f5a3ddcba5" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "1.2.3" +version = "1.3.1" [[deps.Printf]] deps = ["Unicode"] @@ -1447,6 +1464,12 @@ git-tree-sha1 = "afadeba63d90ff223a6a48d2009434ecee2ec9e8" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.7.1" +[[deps.QOI]] +deps = ["ColorTypes", "FileIO", "FixedPointNumbers"] +git-tree-sha1 = "18e8f4d1426e965c7b532ddd260599e1510d26ce" +uuid = "4b34888f-f399-49d4-9bb3-47ed5cae4e65" +version = "1.0.0" + [[deps.QuadGK]] deps = ["DataStructures", "LinearAlgebra"] git-tree-sha1 = "78aadffb3efd2155af139781b8a8df1ef279ea39" @@ -1473,16 +1496,16 @@ uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.2.1" [[deps.RecursiveArrayTools]] -deps = ["ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] -git-tree-sha1 = "c944fa4adbb47be43376359811c0a14757bdc8a8" +deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "LinearAlgebra", "RecipesBase", "Requires", "StaticArrays", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5144e1eafb2ecc75765888a4bdcd3a30a6a08b14" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.20.0" +version = "2.24.1" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "StrideArraysCore", "TriangularSolve"] -git-tree-sha1 = "b7edd69c796b30985ea6dfeda8504cdb7cf77e9f" +git-tree-sha1 = "7ad4c2ef15b7aecd767b3921c0d255d39b3603ea" uuid = "f2c3362d-daeb-58d1-803e-2bc74f2840b4" -version = "0.2.5" +version = "0.2.9" [[deps.Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1497,9 +1520,9 @@ version = "0.1.3" [[deps.Requires]] deps = ["UUIDs"] -git-tree-sha1 = "8f82019e525f4d5c669692772a6f4b0a58b06a6a" +git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" -version = "1.2.0" +version = "1.3.0" [[deps.Retry]] git-tree-sha1 = "41ac127cd281bb33e42aba46a9d3b25cd35fc6d5" @@ -1522,9 +1545,9 @@ version = "0.3.0+0" uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[deps.SIMD]] -git-tree-sha1 = "9ba33637b24341aba594a2783a502760aa0bff04" +git-tree-sha1 = "39e3df417a0dd0c4e1f89891a281f82f5373ea3b" uuid = "fdea26ae-647d-5447-a871-4b548cad5224" -version = "3.3.1" +version = "3.4.0" [[deps.SIMDDualNumbers]] deps = ["ForwardDiff", "IfElse", "SLEEFPirates", "VectorizationBase"] @@ -1551,9 +1574,9 @@ version = "0.3.0" [[deps.SciMLBase]] deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "RecipesBase", "RecursiveArrayTools", "StaticArrays", "Statistics", "Tables", "TreeViews"] -git-tree-sha1 = "6f3c31990f63ac67ff6a485ccf77c5d8f7257547" +git-tree-sha1 = "f4862c0cb4e34ed182718221028ba1bf50742108" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.23.1" +version = "1.26.1" [[deps.Scratch]] deps = ["Dates"] @@ -1563,9 +1586,9 @@ version = "1.1.0" [[deps.SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "244586bc07462d22aed0113af9c731f2a518c93e" +git-tree-sha1 = "15dfe6b103c2a993be24404124b8791a09460983" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.10" +version = "1.3.11" [[deps.Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1598,6 +1621,12 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" +[[deps.Sixel]] +deps = ["Dates", "FileIO", "ImageCore", "IndirectArrays", "OffsetArrays", "REPL", "libsixel_jll"] +git-tree-sha1 = "8fb59825be681d451c246a795117f317ecbcaa28" +uuid = "45858cf5-a6b0-47a3-bbea-62219f50df47" +version = "0.1.2" + [[deps.Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1619,15 +1648,15 @@ uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "f33a0f6721b270cdf417f0c986e93c973e5913c8" +git-tree-sha1 = "75c89362201983c500dd34923b015dbecdae7a90" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.19.1" +version = "1.20.0" [[deps.SpecialFunctions]] deps = ["ChainRulesCore", "IrrationalConstants", "LogExpFunctions", "OpenLibm_jll", "OpenSpecFun_jll"] -git-tree-sha1 = "e08890d19787ec25029113e88c34ec20cac1c91e" +git-tree-sha1 = "e6bf188613555c78062842777b116905a9f9dd49" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" -version = "2.0.0" +version = "2.1.0" [[deps.StackViews]] deps = ["OffsetArrays"] @@ -1643,30 +1672,30 @@ version = "0.4.1" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "3c76dde64d03699e074ac02eb2e8ba8254d428da" +git-tree-sha1 = "2884859916598f974858ff01df7dfc6c708dd895" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.2.13" +version = "1.3.3" [[deps.Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] -git-tree-sha1 = "0f2aa8e32d511f758a2ce49208181f7733a0936a" +git-tree-sha1 = "d88665adc9bcf45903013af0982e2fd05ae3d0a6" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.1.0" +version = "1.2.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "2bb0cb32026a66037360606510fca5984ccc6b75" +git-tree-sha1 = "51383f2d367eb3b444c961d485c565e4c0cf4ba0" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" -version = "0.33.13" +version = "0.33.14" [[deps.StatsFuns]] deps = ["ChainRulesCore", "InverseFunctions", "IrrationalConstants", "LogExpFunctions", "Reexport", "Rmath", "SpecialFunctions"] -git-tree-sha1 = "bedb3e17cc1d94ce0e6e66d3afa47157978ba404" +git-tree-sha1 = "f35e1879a71cca95f4826a14cdbf0b9e253ed918" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" -version = "0.9.14" +version = "0.9.15" [[deps.StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "Requires", "SIMDTypes", "Static", "ThreadingUtilities"] @@ -1676,14 +1705,18 @@ version = "0.2.9" [[deps.StructArrays]] deps = ["Adapt", "DataAPI", "StaticArrays", "Tables"] -git-tree-sha1 = "2ce41e0d042c60ecd131e9fb7154a3bfadbf50d3" +git-tree-sha1 = "d21f2c564b21a202f4677c0fba5b5ee431058544" uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a" -version = "0.6.3" +version = "0.6.4" [[deps.SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[deps.SuiteSparse_jll]] +deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"] +uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" + [[deps.Suppressor]] git-tree-sha1 = "a819d77f31f83e5792a76081eee1ea6342ab8787" uuid = "fd094767-a336-5f1f-9728-57cf17d0bbfb" @@ -1721,15 +1754,15 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[deps.ThreadingUtilities]] deps = ["ManualMemory"] -git-tree-sha1 = "03013c6ae7f1824131b2ae2fc1d49793b51e8394" +git-tree-sha1 = "884539ba8c4584a3a8173cb4ee7b61049955b79c" uuid = "8290d209-cae3-49c0-8002-c8c24d57dab5" -version = "0.4.6" +version = "0.4.7" [[deps.TiffImages]] deps = ["ColorTypes", "DataStructures", "DocStringExtensions", "FileIO", "FixedPointNumbers", "IndirectArrays", "Inflate", "OffsetArrays", "PkgVersion", "ProgressMeter", "UUIDs"] -git-tree-sha1 = "c342ae2abf4902d65a0b0bf59b28506a6e17078a" +git-tree-sha1 = "991d34bbff0d9125d93ba15887d6594e8e84b305" uuid = "731e570b-9d59-4bfa-96dc-6df516fadf69" -version = "0.5.2" +version = "0.5.3" [[deps.TranscodingStreams]] deps = ["Random", "Test"] @@ -1745,9 +1778,9 @@ version = "0.3.0" [[deps.TriangularSolve]] deps = ["CloseOpenIntervals", "IfElse", "LayoutPointers", "LinearAlgebra", "LoopVectorization", "Polyester", "Static", "VectorizationBase"] -git-tree-sha1 = "ec9a310324dd2c546c07f33a599ded9c1d00a420" +git-tree-sha1 = "c3ab8b77b82fd92e2b6eea8a275a794d5a6e4011" uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" -version = "0.1.8" +version = "0.1.9" [[deps.URIs]] git-tree-sha1 = "97bbe755a53fe859669cd907f2d96aee8d2c1355" @@ -1774,15 +1807,15 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "0992ed0c3ef66b0390e5752fe60054e5ff93b908" +git-tree-sha1 = "b95e0b8a8d1b6a6c3e0b3ca393a7a285af47c264" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.9.2" +version = "1.10.1" [[deps.VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "Hwloc", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "17e5847bb36730d90801170ecd0ce4041a3dde86" +git-tree-sha1 = "e9a35d501b24c127af57ca5228bcfb806eda7507" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.22" +version = "0.21.24" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -1869,10 +1902,10 @@ uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10" version = "1.4.0+3" [[deps.Zarr]] -deps = ["AWS", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "OffsetArrays", "Pkg"] -git-tree-sha1 = "18ac3fd29790edeee42bfed5020b12ae61a029d0" +deps = ["AWS", "Blosc", "CodecZlib", "DataStructures", "Dates", "DiskArrays", "HTTP", "JSON", "LRUCache", "OffsetArrays", "Pkg", "URIs"] +git-tree-sha1 = "47a53313f4493879345f217e20146c4c40774520" uuid = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99" -version = "0.6.3" +version = "0.7.1" [[deps.Zlib_jll]] deps = ["Libdl"] @@ -1897,10 +1930,10 @@ uuid = "9a68df92-36a6-505f-a73e-abb412b6bfb4" version = "0.2.2+0" [[deps.libass_jll]] -deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "acc685bcf777b2202a904cdcb49ad34c2fa1880c" +deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] +git-tree-sha1 = "5982a94fcba20f02f42ace44b9894ee2b140fe47" uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0" -version = "0.14.0+4" +version = "0.15.1+0" [[deps.libblastrampoline_jll]] deps = ["Artifacts", "Libdl", "OpenBLAS_jll"] @@ -1908,9 +1941,9 @@ uuid = "8e850b90-86db-534c-a0d3-1478176c7d93" [[deps.libfdk_aac_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "7a5780a0d9c6864184b3a2eeeb833a0c871f00ab" +git-tree-sha1 = "daacc84a041563f965be61859a36e17c4e4fcd55" uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280" -version = "0.1.6+4" +version = "2.0.2+0" [[deps.libpng_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"] @@ -1918,6 +1951,12 @@ git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c" uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" version = "1.6.38+0" +[[deps.libsixel_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "78736dab31ae7a53540a6b752efc61f77b304c5b" +uuid = "075b6546-f08a-558a-be8f-8157d0f608a5" +version = "1.8.6+1" + [[deps.libsodium_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "848ab3d00fe39d6fbc2a8641048f8f272af1c51e" @@ -1926,9 +1965,9 @@ version = "1.0.20+0" [[deps.libvorbis_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "c45f4e40e7aafe9d086379e5578947ec8b95a8fb" +git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+0" +version = "1.3.7+1" [[deps.nghttp2_jll]] deps = ["Artifacts", "Libdl"] @@ -1940,15 +1979,15 @@ uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" [[deps.x264_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d713c1ce4deac133e3334ee12f4adff07f81778f" +git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2" uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a" -version = "2020.7.14+2" +version = "2021.5.5+0" [[deps.x265_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "487da2f8f2f0c8ee0e83f39d13037d6bbf0a45ab" +git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9" uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76" -version = "3.0.0+3" +version = "3.5.0+0" """ # ╔═║ Cell order: