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Commit 5866b3e

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author
Philippe Rocca-Serra
committed
fixing templates to clear testing issues, see issue #39
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.gitignore

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# Byte-compiled / optimized / DLL files
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.DS_Store
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.gitignore
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__pycache__/
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*.py[cod]
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*$py.class

mzml2isa/templates/i_mzML.txt

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@@ -73,7 +73,7 @@ Study Protocol Type Term Source REF "CRISP" "NCIT" "NCIT" "NCIT" "OBI" "MI"
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Study Protocol Description "{description[sample_collect]}" "{description[extraction]}" "{description[chroma]}" "{description[mass_spec]}" "{description[data_trans]}" "{description[metabo_id]}"
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Study Protocol URI "" "" "" "" "" ""
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Study Protocol Version "" "" "" "" "" ""
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Study Protocol Parameters Name "" "Post Extraction;Derivatization" "Chromatography Instrument;Column type;Column model" "Instrument software;Detector mode;Spectrum representation;Inlet type;Number of scans;Scan m/z range;Detector;Instrument serial number;Raw data file checksum type;Mass analyzer;Instrument manufacturer;Raw data file format;Scan polarity;Raw data file checksum value;Instrument software version;Native spectrum identifier format;Instrument;Data file content;Time range;Ion source" "" "Data Transformation software;Data Transformation software version"
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Study Protocol Parameters Name "" "Post Extraction;Derivatization" "Chromatography Instrument;Column type;Column model" "Instrument software;Detector mode;Spectrum representation;Inlet type;Number of scans;Scan m/z range;Detector;Instrument serial number;Data file checksum type;Mass analyzer;Instrument manufacturer;Raw data file format;Scan polarity;Raw data file checksum value;Instrument software version;Native spectrum identifier format;Instrument;Data file content;Time range;Ion source" "" "Data Transformation software;Data Transformation software version"
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Study Protocol Parameters Name Term Accession Number "" ";" ";;" ";;;;;;;;;;;;;;;;;;;" "" ";"
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Study Protocol Parameters Name Term Source REF "" ";" ";;" ";;;;;;;;;;;;;;;;;;;" "" ";"
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Study Protocol Components Name "" "" "" "" "" ""

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