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Message as undefined reference to std:...
Fixed installing gcc/++-10
usr/bin/ld: /tmp/ccY3P97U.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::operator=(std::vector<MDObject*, std::allocator<MDObject*> > const&)':
<artificial>:(.text+0x2346): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_release()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_addref()'
collect2: error: ld returned 1 exit status
scons: *** [bin/xmipp_transform_mask] Error 1
/usr/bin/ld: /tmp/ccCnXBqG.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::vector(std::vector<MDObject*, std::allocator<MDObject*> > const&)':
<artificial>:(.text+0x1f9e): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: /tmp/ccCnXBqG.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::vector(std::vector<MDObject*, std::allocator<MDObject*> > const&, std::allocator<MDObject*> const&)':
<artificial>:(.text+0x204e): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: /tmp/ccCnXBqG.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::operator=(std::vector<MDObject*, std::allocator<MDObject*> > const&)':
<artificial>:(.text+0x2346): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_release()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_addref()'
collect2: error: ld returned 1 exit status
scons: *** [bin/xmipp_angular_continuous_assign] Error 1
/usr/bin/ld: /tmp/cc8R1uj3.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::vector(std::vector<MDObject*, std::allocator<MDObject*> > const&)':
<artificial>:(.text+0x93ce): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: /tmp/cc8R1uj3.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::vector(std::vector<MDObject*, std::allocator<MDObject*> > const&, std::allocator<MDObject*> const&)':
<artificial>:(.text+0x947e): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: /tmp/cc8R1uj3.ltrans0.ltrans.o: in function `std::vector<MDObject*, std::allocator<MDObject*> >::operator=(std::vector<MDObject*, std::allocator<MDObject*> > const&)':
<artificial>:(.text+0x9776): undefined reference to `std::__throw_bad_array_new_length()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_release()'
/usr/bin/ld: lib/libXmipp.so: undefined reference to `std::__exception_ptr::exception_ptr::_M_addref()'
collect2: error: ld returned 1 exit status
scons: *** [bin/xmipp_reconstruct_significant] Error 1
scons: building terminated because of errors.
Some error occurred during the compilation of 'xmipp' ('bin/xmipp_reconstruct_significant').
Traceback (most recent call last):
File "/home/erney/software/miniconda3/envs/scipion3/bin/emprogram", line 8, in <module>
sys.exit(main())
File "/home/erney/software/miniconda3/envs/scipion3/lib/python3.8/site-packages/pwem/cmd/program.py", line 43, in main
runProgram(program, params)
File "/home/erney/software/miniconda3/envs/scipion3/lib/python3.8/site-packages/pwem/utils.py", line 73, in runProgram
pwutils.runJob(None, program, params, env=env)
File "/home/erney/software/miniconda3/envs/scipion3/lib/python3.8/site-packages/pyworkflow/utils/process.py", line 52, in runJob
return runCommand(command, env, cwd)
File "/home/erney/software/miniconda3/envs/scipion3/lib/python3.8/site-packages/pyworkflow/utils/process.py", line 67, in runCommand
check_call(command, shell=True, stdout=sys.stdout, stderr=sys.stderr,
File "/home/erney/software/miniconda3/envs/scipion3/lib/python3.8/subprocess.py", line 364, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command ' xmipp-bundle/xmipp ' returned non-zero exit status 1.
The text was updated successfully, but these errors were encountered:
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Message as
undefined reference to std:...
Fixed installing gcc/++-10
The text was updated successfully, but these errors were encountered: