snp -> sub

ThijsMaas · ThijsMaas · commit 886fdeab6686 · 2024-02-07T09:48:16.000+01:00
diff --git a/iss/error_models/__init__.py b/iss/error_models/__init__.py
@@ -103,7 +103,7 @@ def mut_sequence(self, record, orientation):
                             "ref": mutable_seq[position],
                             "alt": mutated_nuc,
                             "quality": qual,
-                            "type": "snp",
+                            "type": "sub",
                         }
                     )
                 mutable_seq[position] = mutated_nuc

Original file line number	Diff line number	Diff line change
`@@ -103,7 +103,7 @@ def mut_sequence(self, record, orientation):`
`103`	`103`	`"ref": mutable_seq[position],`
`104`	`104`	`"alt": mutated_nuc,`
`105`	`105`	`"quality": qual,`
`106`		`- "type": "snp",`
	`106`	`+ "type": "sub",`
`107`	`107`	`}`
`108`	`108`	`)`
`109`	`109`	`mutable_seq[position] = mutated_nuc`