diff --git a/Pipfile b/Pipfile index 23e513e..b10ba1e 100644 --- a/Pipfile +++ b/Pipfile @@ -7,7 +7,6 @@ name = "pypi" numpy = "*" scipy = "*" biopython = "*" -joblib = "*" pysam = "*" requests = "*" urllib3 = ">=1.26.5" diff --git a/Pipfile.lock b/Pipfile.lock index 131292c..07e8e12 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "caa348757d63e3af7628f055eb7f62e2942079b85a3dd3fdbbd8542f9603dcd4" + "sha256": "64c2c83d4c2bfe09b4794811206eed04b5e1a8a1692f76be6817380f26fb4a9a" }, "pipfile-spec": 6, "requires": {}, @@ -161,15 +161,6 @@ "markers": "python_version >= '3.5'", "version": "==3.4" }, - "joblib": { - "hashes": [ - "sha256:92f865e621e17784e7955080b6d042489e3b8e294949cc44c6eac304f59772b1", - "sha256:ef4331c65f239985f3f2220ecc87db222f08fd22097a3dd5698f693875f8cbb9" - ], - "index": "pypi", - "markers": "python_version >= '3.7'", - "version": "==1.3.2" - }, "numpy": { "hashes": [ "sha256:06fa1ed84aa60ea6ef9f91ba57b5ed963c3729534e6e54055fc151fad0423f0a", diff --git a/doc/iss/install.rst b/doc/iss/install.rst index 83e835d..a80dd58 100644 --- a/doc/iss/install.rst +++ b/doc/iss/install.rst @@ -18,7 +18,6 @@ To install InSilicoSeq, type the following in your terminal: It will install InSilicoSeq as well as the following dependencies: * biopython -* joblib * numpy * pysam * scipy diff --git a/setup.py b/setup.py index e84d4c0..6dec9ee 100644 --- a/setup.py +++ b/setup.py @@ -23,7 +23,7 @@ license="MIT", packages=find_packages(), tests_require=["pytest"], - install_requires=["numpy", "scipy", "biopython>=1.79", "pysam>=0.15.1", "joblib", "requests"], + install_requires=["numpy", "scipy", "biopython>=1.79", "pysam>=0.15.1", "requests"], include_package_data=True, entry_points={ "console_scripts": ["iss = iss.app:main"],