List index out of range

[shreya1singh728]

Hii,
I am running DBSCAN-SWA on a large dataset and I am facing this error on some files. Please help.

Building reference index... [0.788333s]
Building query index... [0.006586s]
Building seed filter... [0.042056s]
Searching alignments... [0.031454s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 2.
Building reference index... [0.855179s]
Building query index... [0.007275s]
Building seed filter... [0.041847s]
Searching alignments... [0.031047s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 3.
Building reference index... [0.743206s]
Building query index... [0.006322s]
Building seed filter... [0.042643s]
Searching alignments... [0.029082s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 0.
Building reference index... [0.729244s]
Building query index... [0.006085s]
Building seed filter... [0.04255s]
Searching alignments... [0.029532s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 1.
Building reference index... [0.76787s]
Building query index... [0.006812s]
Building seed filter... [0.042375s]
Searching alignments... [0.028811s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 2.
Building reference index... [0.802298s]
Building query index... [0.006647s]
Building seed filter... [0.04129s]
Searching alignments... [0.02878s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 3.
Building reference index... [0.745652s]
Building query index... [0.006103s]
Building seed filter... [0.041592s]
Searching alignments... [0.027827s]
Deallocating buffers... [0.027922s]
Computing alignments... [2.45037s]
Deallocating reference... [0.015322s]
Loading reference sequences... [0.000523s]
Deallocating buffers... [0.000536s]
Deallocating queries... [0.000546s]
Loading query sequences... [0.000432s]
Closing the input file... [0.000357s]
Closing the output file... [0.000669s]
Closing the database file... [0.000352s]
Deallocating taxonomy... [0.000322s]
Total time = 37.9623s
Reported 15082 pairwise alignments, 15123 HSPs.
815 queries aligned.
start to visualize the results!
Traceback (most recent call last):
File "/home/shreya/DBSCAN-SWA-1/bin/dbscan-swa.py", line 2807, in
predict_prophage(strain_id,inputfile_bac,outdir,add_annotation,prefix)
File "/home/shreya/DBSCAN-SWA-1/bin/dbscan-swa.py", line 2587, in predict_prophage
visualize(save_prophage_file,save_prophage_nucl_file,save_prophage_protein_file,prophage_region_annotate_dir,add_annotation,templeate_file,save_html_file,prefix)
File "/home/shreya/DBSCAN-SWA-1/bin/dbscan-swa.py", line 2138, in visualize
prophage_id = line.split('\n')[0].strip().split('|')[1]

IndexError: list index out of range