From 913d17a8cc18cb9a9e352f15dd6701f2ffeba228 Mon Sep 17 00:00:00 2001 From: Federico Gueli <87669813+FedeGueli@users.noreply.github.com> Date: Mon, 17 Jul 2023 15:34:52 +0200 Subject: [PATCH] Update lineage_notes.txt MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit add sars-cov-2-variants/lineage-proposals#54 to XBB.1.16.16 add sars-cov-2-variants/lineage-proposals#208 to XBB.1.49 add #2083 to HF.1 add  #2093 to GK.1.2 add sars-cov-2-variants/lineage-proposals#363 to HD.1 add  #1832 to FU.4 --- lineage_notes.txt | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index ceed6df8..39ecf79c 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2769,7 +2769,7 @@ XBB.1.5.69 ORF1a:V2943I,C22513T, USA XBB.1.5.70 S:L455F, S:F456L (T22928C), ORF1a:A4068S, Brazil, from #1982 GK.1 Alias of XBB.1.5.70.1, S:S704L, Brazil, from #2025 GK.1.1 Alias of XBB.1.5.70.1.1, S:T573I, Brazil -GK.1.2 Alias of XBB.1.5.70.1.2, S:N185D, Brazil +GK.1.2 Alias of XBB.1.5.70.1.2, S:N185D, Brazil from #2093 GK.1.3 Alias of XBB.1.5.70.1.3, ORF1a:E633A, ORF1b:D1130G, USA/Canada GK.2 Alias of XBB.1.5.70.2, S:V511I, from sars-cov-2-variants/lineage-proposals#300 XBB.1.5.71 S:V511I, Spain @@ -2798,7 +2798,7 @@ XBB.1.5.90 S:P621S, ORF1ab:S6713L, Belgium/France, from #1849 XBB.1.5.91 S:P621S, USA XBB.1.5.92 ORF1a:T1168I, Ecuador XBB.1.5.93 C337T, C19186T, USA -HD.1 Alias of XBB.1.5.93.1, S:T346I, USA/Dominican Republic +HD.1 Alias of XBB.1.5.93.1, S:T346I, USA/Dominican Republic from sars-cov-2-variants/lineage-proposals#363 XBB.1.5.94 S:Q613H, T25461C, France XBB.1.6 USA, S:L216F, S:H146K, from issue #1428 XBB.1.7 USA-NY, S:V608I @@ -2917,7 +2917,7 @@ FU.1 Alias of XBB.1.16.1.1, T3802C FU.2 Alias of XBB.1.16.1.2, C8692T FU.2.1 Alias of XBB.1.16.1.2.1, S:E619Q, Vietnam FU.3 Alias of XBB.1.16.1.3, C11665T, India-RJ -FU.4 Alias of XBB.1.16.1.4, S:Y453F, T29410C +FU.4 Alias of XBB.1.16.1.4, S:Y453F, T29410C from #1832 XBB.1.16.2 Defined by ORF3a:V13L, ORF1a:P926H, India GY.1 Alias of XBB.1.16.2.1, S:L84I, ORF1a:A4068S, China, from #2066 GY.2 Alias of XBB.1.16.2.2, S:T883I @@ -2934,10 +2934,10 @@ XBB.1.16.10 N:G25D, from #1984 XBB.1.16.11 S:P521T, India XBB.1.16.12 S:Q52H, South Korea XBB.1.16.13 ORF1a:G519S, ORF1a:G1101D, India -HF.1 XBB.1.16.13.1, S:K304N, South Korea/Japan +HF.1 XBB.1.16.13.1, S:K304N, South Korea/Japan from #2083 XBB.1.16.14 S:L452Q, after A11782G, India/France/Canada, from sars-cov-2-variants/lineage-proposals#329 XBB.1.16.15 S:K147N, S:P521S, T10756C, T14067C, on C27513T branch, from #2092 -XBB.1.16.16 S:Q613H, S:S412N, India-GJ/USA/Pakistan +XBB.1.16.16 S:Q613H, S:S412N, India-GJ/USA/Pakistan from sars-cov-2-variants/lineage-proposals#54 XBB.1.17 Defined by T27995C and ORF1a:L469F, from issue #1712 XBB.1.17.1 Defined by S:215H, S:S486P, from issue #1712 GA.1 Alias of XBB.1.17.1.1, ORF1a:G728C @@ -3019,7 +3019,7 @@ XBB.1.46 ORF1a:C1114F, Singapore/Malaysia XBB.1.47 ORF1a:T1761I, ORF1a:C2180Y, ORF1a:I2854V, Philippines/Singapore/Japan XBB.1.47.1 S:486P, S:A260V, S:V1122G, Japan/USA/Australia/Germany XBB.1.48 S:L455F, S:F456L (22928C), C2509T, Pakistan -XBB.1.49 S:346S, S:486P, on C16648A, A27965G, pre ORF8:8* branch with XBB.1.33, Somalia +XBB.1.49 S:346S, S:486P, on C16648A, A27965G, pre ORF8:8* branch with XBB.1.33, Somalia from sars-cov-2-variants/lineage-proposals#208 XBB.2 Defined by S:D253G, from issue #1173 XBB.2.1 Defined by S:N764R (C23853G), two step mutation on top of C23854A (S:N764K defining of all Omicrons) XBB.2.2 Defined by S:Q613H