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I have been using blobtools to plot the diversity of symbiotic bacteria found in a plant. Everything seems to work great, the .bam file shows about 98% mapped reads depending on sample. However, when I get to plot the results, the coverage plot that is produced shows about 50% mapped reads. Why the difference?
Thank you very much for your support!
Sandrine
The text was updated successfully, but these errors were encountered:
Hi,
I have been using blobtools to plot the diversity of symbiotic bacteria found in a plant. Everything seems to work great, the .bam file shows about 98% mapped reads depending on sample. However, when I get to plot the results, the coverage plot that is produced shows about 50% mapped reads. Why the difference?
Thank you very much for your support!
Sandrine
The text was updated successfully, but these errors were encountered: