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Paper.test.js
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Paper.test.js
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import test from 'ava';
import gql from 'graphql-tag';
import { client } from '../../client';
test('Paper', async t => {
t.plan(1);
const query = gql`
query {
Paper(first: 3) {
_hash_id
cord_uid
journal
publish_time
source
title
url
authorCollection(first: 3) {
id
authors(first: 3) {
position
author {
_hash_id
email
__typename
}
__typename
}
__typename
}
abstractCollection(first: 3) {
id
abstracts(first: 3) {
position
abstract {
_hash_id
section
fragments {
text
sequence
kind
next {
kind
__typename
}
mentionsGeneSymbols(first: 3) {
score
geneSymbol {
sid
__typename
}
__typename
}
__typename
}
__typename
}
__typename
}
__typename
}
referenceCollection(first: 3) {
id
references(first: 3) {
position
reference {
_hash_id
name
__typename
}
__typename
}
__typename
}
bodyTextCollection(first: 3) {
id
bodyTexts(first: 3) {
position
bodyText {
_hash_id
section
fragments {
text
sequence
kind
next {
kind
__typename
}
mentionsGeneSymbols(first: 3) {
score
geneSymbol {
sid
__typename
}
__typename
}
__typename
}
__typename
}
__typename
}
__typename
}
paperId(first: 3) {
position
id {
id
type
__typename
}
__typename
}
__typename
}
}
`;
const expected = {
"data": {
"Paper": [
{
"_hash_id": "84b069ab23fb0ecebe6925af9c2b18ae",
"cord_uid": "ocp6yodg",
"journal": "BMC Infect Dis",
"publish_time": "2011-12-28",
"source": "PMC",
"title": "Timeliness of contact tracing among flight passengers for influenza A/H1N1 2009",
"url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3265549/",
"authorCollection": [
{
"id": "5c7ca2368972834265ab652305e2cba4",
"authors": [
{
"position": 1,
"author": {
"_hash_id": "d9dd38fabf963cf2d01ad168cee5c1ac",
"email": null,
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
},
{
"position": 3,
"author": {
"_hash_id": "6db646159bcf9275e510eb2375cc7342",
"email": null,
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
},
{
"position": 2,
"author": {
"_hash_id": "75ab0e3bebdfdaa895331b24eac15fe0",
"email": null,
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
}
],
"__typename": "AuthorCollection"
},
{
"id": "774b16de62379f2eb9cd2e5f948069f1",
"authors": [
{
"position": 2,
"author": {
"_hash_id": "c3ccd184ad3c4c8a88a20ae86ed00d18",
"email": "",
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
},
{
"position": 1,
"author": {
"_hash_id": "b60990dfc94b8b78b3b924f8e59fe2fd",
"email": "",
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
},
{
"position": 0,
"author": {
"_hash_id": "e60ce2b1c10f62e09a4120ef2f9e8260",
"email": "",
"__typename": "Author"
},
"__typename": "_AuthorCollectionAuthors"
}
],
"__typename": "AuthorCollection"
}
],
"abstractCollection": [
{
"id": "f1200e665e72a67c2bc7a0e88d995ee6",
"abstracts": [
{
"position": 0,
"abstract": {
"_hash_id": "16a7fd8202b55889224747731cd2b718",
"section": null,
"fragments": [
{
"text": "In a retrospective study, dates of flight arrival, onset of illness, laboratory diagnosis, CT request and identification of contacts details through passenger lists, following CT requests to the RIVM for flights landed at Schiphol Airport were collected and analyzed",
"sequence": 4,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Three of these were declined as over 4 days had elapsed since flight arrival",
"sequence": 6,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "BACKGROUND: During the initial containment phase of influenza A/H1N1 2009, close contacts of cases were traced to provide antiviral prophylaxis within 48 h after exposure and to alert them on signs of disease for early diagnosis and treatment",
"sequence": 0,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "CT had little additional value for alerting passengers for disease symptoms, as this information already was provided during and after the flight",
"sequence": 14,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "CI involving Dutch airlines was faster than non-Dutch airlines (P < 0,05)",
"sequence": 10,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 2.5029473304748535,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "In 17 out of 21 requests, contact details were obtained within 7 days after arrival (81%)",
"sequence": 7,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Passenger locator cards did not improve timeliness of CI",
"sequence": 11,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 3.0035369396209717,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "In four flights (19%), contacts were not identified or only after > 7 days",
"sequence": 9,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "METHODS: Elapsed days between date of flight arrival and the date passenger lists became available (contact details identified - CI) was used as proxy for timeliness of CT",
"sequence": 3,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Public health authorities should take into account patient delays in seeking medical advise and laboratory confirmation in relation to maximum time to provide postexposure prophylaxis when deciding to install contact tracing measures",
"sequence": 15,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "The average delay between arrival and CI was 3,9 days (range 2-7), mainly caused by delay in diagnosis of the index patient after arrival (2,6 days)",
"sequence": 8,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 1.752063274383545,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "This study evaluates the timeliness of flight-contact tracing (CT) as performed following national and international CT requests addressed to the Center of Infectious Disease Control (CIb/RIVM), and implemented by the Municipal Health Services of Schiphol Airport",
"sequence": 2,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Passengers seated on the same row, two rows in front or behind a patient infectious for influenza, during a flight of ≥ 4 h were considered close contacts",
"sequence": 1,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "RESULTS: 24 requests for CT were identified",
"sequence": 5,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "International standardization of CT guidelines is recommended.",
"sequence": 16,
"kind": "Abstract",
"next": null,
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "CONCLUSION: CT for influenza A/H1N1 2009 among flight passengers was not successful for timely provision of prophylaxis",
"sequence": 13,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "In only three flights contact details were identified within 2 days after arrival",
"sequence": 12,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
}
],
"__typename": "Abstract"
},
"__typename": "_AbstractCollectionAbstracts"
}
],
"__typename": "AbstractCollection"
},
{
"id": "f0aa7742531e76aa0e9b8bb728524206",
"abstracts": [
{
"position": 1,
"abstract": {
"_hash_id": "1cfafd171e7bf9f345e8478f33e9c807",
"section": "Abstract",
"fragments": [
{
"text": "In four flights (19%), contacts were not identified or only after > 7 days",
"sequence": 4,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "The average delay between arrival and CI was 3,9 days (range 2-7), mainly caused by delay in diagnosis of the index patient after arrival (2,6 days)",
"sequence": 3,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 1.752063274383545,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "Passenger locator cards did not improve timeliness of CI",
"sequence": 6,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 3.0035369396209717,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "In 17 out of 21 requests, contact details were obtained within 7 days after arrival (81%)",
"sequence": 2,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "CT had little additional value for alerting passengers for disease symptoms, as this information already was provided during and after the flight",
"sequence": 9,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "International standardization of CT guidelines is recommended.",
"sequence": 11,
"kind": "Abstract",
"next": null,
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Conclusion: CT for influenza A/H1N1 2009 among flight passengers was not successful for timely provision of prophylaxis",
"sequence": 8,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Public health authorities should take into account patient delays in seeking medical advise and laboratory confirmation in relation to maximum time to provide postexposure prophylaxis when deciding to install contact tracing measures",
"sequence": 10,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Three of these were declined as over 4 days had elapsed since flight arrival",
"sequence": 1,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "In only three flights contact details were identified within 2 days after arrival",
"sequence": 7,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "CI involving Dutch airlines was faster than non-Dutch airlines (P < 0,05)",
"sequence": 5,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [
{
"score": 2.5029473304748535,
"geneSymbol": {
"sid": "CI",
"__typename": "GeneSymbol"
},
"__typename": "_FromAbstractMentionsGeneSymbols"
}
],
"__typename": "FromAbstract"
},
{
"text": "Results: 24 requests for CT were identified",
"sequence": 0,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
}
],
"__typename": "Abstract"
},
"__typename": "_AbstractCollectionAbstracts"
},
{
"position": 0,
"abstract": {
"_hash_id": "bb226cc2962db10fb71684cc40988d6d",
"section": "Abstract",
"fragments": [
{
"text": "Background: During the initial containment phase of influenza A/H1N1 2009, close contacts of cases were traced to provide antiviral prophylaxis within 48 h after exposure and to alert them on signs of disease for early diagnosis and treatment",
"sequence": 0,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
},
"mentionsGeneSymbols": [],
"__typename": "FromAbstract"
},
{
"text": "Passengers seated on the same row, two rows in front or behind a patient infectious for influenza, during a flight of ≥ 4 h were considered close contacts",
"sequence": 1,
"kind": "Abstract",
"next": {
"kind": "Abstract",
"__typename": "FromAbstract"
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