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WIP: draft PR merging Jason's changes to main. #20

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@theJasonFan theJasonFan commented Jun 26, 2024

@rob-p A quick and dirty changeling logging differences to main.

Notable changes:

  • QOL improvements to the naive kmer API (checked conversions, push_char)
  • Canonical minimizer iterators to emit minimizers in O(n) time.

Todos:

  • Document canonical minimizer algorithm / meaning of canonical minimizer
  • Remove large commented code blocks
  • Fix failing CI tests.

theJasonFan and others added 30 commits March 7, 2023 14:38
Merge main changes back into dev
}
}

// pub struct CanonicalSuperKmerIterator<'a, T: BuildHasher> {
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Ack. This should be pruned.

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}

// #[test]
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If these tests are old I can remove this too.

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2 participants