.gitignore

.DS_Store
._.DS_Store
.Rproj.user
.Rhistory
.RData
.Ruserdata
.zip
*.html
*.Rapp.history
*._.DS_Store
cytomapper.Rproj

# Datasets generated by the "LoadPancreasData.Rmd" and "LoadPancreasImages.Rmd" scripts
inst/extdata/pancreas_images.rds
inst/extdata/pancreas_masks.rds
inst/extdata/pancreas_sce.rds

inst/scripts/pancreas_images.rds
inst/scripts/pancreas_masks.rds
inst/scripts/pancreas_sce.rds

# Temporary files downloaded by the "LoadPancreasData.Rmd" and "LoadPancreasImages.Rmd" scripts
inst/extdata/CellSubset.csv
inst/extdata/All_Image.csv
inst/extdata/CellTypes.csv
inst/extdata/Donors.csv
inst/extdata/Panel.csv
inst/extdata/ChannelMass.csv
inst/extdata/*_full_clean.tiff
inst/extdata/*_full_mask.tiff

inst/scripts/CellSubset.csv
inst/scripts/All_Image.csv
inst/scripts/CellTypes.csv
inst/scripts/Donors.csv
inst/scripts/Panel.csv
inst/scripts/ChannelMass.csv
inst/scripts/*_full_clean.tiff
inst/scripts/*_full_mask.tiff
*.DS_Store
docs