The repository contains the bioinformatic workflow used in the paper Roitman et al (2023) "Infection cycle and phylogeny of a Polinton-like virus with a virophage lifestyle infecting Phaeocystis globosa". See also results and additional data in the figshare repository.
The workflow is built using snakemake. Dependencies are under the control of conda (see --use-conda). Run as snakemake --cores 10 --use-conda -- that will provide further instructions.