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ChangeLog
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2011-04-27 Claude Lepage <[email protected]>
* fixed bug in sphere_resample_obj for parsing of lines with
leading spaces
2009-11-20 Claude Lepage <[email protected]>
* extended mincdefrag for large volumes
2008-12-19 Claude Lepage <[email protected]>
* added rgb to volume_object_evaluate for DTI maps
2008-01-08 Claude Lepage <[email protected]>
* added sphere_resample_obj.in for resampling an object
2007-12-20 Claude Lepage <[email protected]>
* removed -mask_binvalue from mincmask.c and fixed the old way of
thresholding for the mask
* removed stx_segment and moved it to registration package
2007-10-15 Claude Lepage <[email protected]>
* move all obj tools to bicpl/tools where they should belong
2007-05-31 Claude Lepage <[email protected]>
* fixed convex_hull.c
* fixed surface_mask.c and surface_mask2.c to save output with same dimensions
order as original image (was always z, y, x before)
* added -mask_binvalue to mincmask.c
* fixed stx_segment to use mincmask with -mask_binvalue
* created clean_surface_labels.c
2007-01-30 Claude Lepage <[email protected]>
* add icbm_make_templates.pl
2006-06-22 Claude Lepage <[email protected]>
* modify multispectral_stx_registration for new pipeline
* use model icbm_avg_152_t1_tal_nlin_symmetric_VI in nlfit_smr
2006-06-01 Claude Lepage <[email protected]>
* fix a cast in dump_vertex_normal_diffs.c
2006-05-12 Claude Lepage <[email protected]>
* create new convert_object to toggle file format between ascii/binary
for surface .obj files.
* Bump version to 1-6-3.
2006-05-04 Claude Lepage <[email protected]>
* Change perl scripts from .pl to .in and remove path dependencies
* Bump version to 1-6-2.
2006-04-10 Claude Lepage <[email protected]>
* Fix the same small bug in mincdefrag and mincskel for image
bounds checking
* Bump version to 1-6-1.
2006-03-17 Claude Lepage <[email protected]>
* Add mincdefrag and mincskel
* Bump version to 1-6.
2006-02-26 Jonathan Harlap <[email protected]>
* Update version to 1.5
2005-11-09 Jonathan Harlap <[email protected]>
* Add print_world_values
2005-10-27 Andrew Janke <[email protected]>
* updated smooth_mask.pl to use mni_perllib
2005-08-15 Bert Vincent <[email protected]>
* Add regional_thickness and remap_to_lobes
2005-05-31 Bert Vincent <[email protected]>
* Fix smooth_mask to use DefaultArgs as it used to.
2005-05-30 Bert Vincent <[email protected]>
* Add suppress_fat
* More fixes to multispectral_stx_registration.pl
2005-05-26 Bert Vincent <[email protected]>
* Add mincmask
* More minor build tweaks
2005-05-25 Bert Vincent <[email protected]>
* Build fixes
* Added orphan perl scripts
2005-03-18 Andrew Janke <[email protected]>
* replaced all sqrtf()'s with sqrt() for OSX build
2005-03-01 Bert Vincent <[email protected]>
* Added normalize_pet
2004-04-22 Bert Vincent <[email protected]>
* Added find_peaks
* Update version to 1.4
2004-04-07 Bert Vincent <[email protected]>
* Added match_tags
2004-02-05 Jason Lerch <[email protected]>
* surface_mask2 now outputs volumes in the same dimension order as
the input volume.
2003-11-17 Steve ROBBINS <[email protected]>
* COPYING: New. License text copied from bicpl.
* ParseArgv.c:
* ParseArgv.h: Remove. These files are now installed as part of minc.
* Makefile.am (volume_object_evaluate_SOURCES): Remove ParseArgv.c.
2003-10-14 Steve M. Robbins <[email protected]>
* ascii_binary.c: Delete. This program was moved to package
bicpl on 2001-04-02 and the former is a prerequisite of this
package.
* Makefile.am (bin_PROGRAMS): Remove ascii_binary.
2003-09-08 Jason Lerch <[email protected]>
* added a -output_binary_mask option to surface_mask2
2003-08-29 Jason Lerch <[email protected]>
* fixed a bug in surface_mask2 which caused it to fail when the
histogram of the input volume was skewed and the volume had a
datatype other than NC_BYTE. Now reads in volume using
MI_ORIGINAL_TYPE.
2003-04-30 Steve ROBBINS <[email protected]>
* average_objects.c: Completed the code.
2003-03-02 Steve M. Robbins <[email protected]>
* configure.ac: Set version to 1.3.
2003-03-02 Steve M. Robbins <[email protected]>
Release 1.2.
* flatten_polygons.c:
* fit_curve2.c:
* colour_object.c:
* two_surface_resample.c (main):
* refine_mesh.c (main):
* compute_bounding_view.c (main):
* box_filter_volume_nd.c (box_filter_volume):
* box_filter_volume.c (main): Remove unused variable declarations.
* surface_mask2.c:
* make_line_links.c:
* fit_3d.c:
* fit_curve.c:
* find_buried_surface.c: Remove unused function declarations.
2003-02-25 Steve ROBBINS <[email protected]>
* surface_mask2.c (main): Return zero on success.
2003-01-25 Steve M. Robbins <[email protected]>
* configure.ac: Set version to 1.2.
2003-01-25 Steve M. Robbins <[email protected]>
* configure.ac: Set version to 1.1.
* Makefile.am (m4_files): Add m4/smr_CGAL_MAKEFILE.m4.
2002-04-06 Steve M. Robbins <[email protected]>
* marching_cubes: Get the voxel_to_world_transform from
volume_input structure. Patch from John Sled.
* Makefile.am (bin_PROGRAMS): Add marching_cubes.
2002-04-06 Steve M. Robbins <[email protected]>
* marching_cubes.c: Copied the RCS file
~david/Source/Marching_cubes/RCS/marching_cubes.c,v to the CVS
repository. After checkout, copied the (unchecked-in)
marching_cubes.c file overtop.
2001-11-12 Jason Lerch <[email protected]>
* added ParseArgv.{c,h}
* volume_object_evaluate.c: added ParseArgv includes, added
options letting the user specify whether they want to use linear,
nearest_neighbour, or cubic interpolation in the evaluation.
* Makefile.am: added volume_object_evaluate_SOURCES with
ParseArgv.c
2001-11-07 Steve M. Robbins <[email protected]>
* make_gradient_volume.c (main): Correct parameter ordering
for create_gradient_volume() call.
(create_gradient_volume): Output magnitude rather than squared
magnitude. Set the real_range on output volume correctly.
2001-10-28 Steve M. Robbins <[email protected]>
* mincresample.c:
* mincresample.h: Removed. Was a 1996 version of the files from
MINC.
* Makefile.am: Removed all traces of mincresample. Add
AUTOMAKE_OPTIONS, ACLOCAL_AMFLAGS and EXTRA_DIST so that
"make distcheck" works.
* tagtominc.c (main): Bugfix. Pass tag_id as the structure
ID list, not the patient ID list.
* README: New. Describes the usage of some of these
utilities.
* TODO:
* NEWS: New.
* configure.ac: Use AC_PROG_LIBTOOL instead of AM_.
* autogen.sh: Add explanatory text if directory m4 is not present.
2001-10-22 Steve M. Robbins <[email protected]>
* *.c: Replace <internal_volume_io.h> by
<volume_io/internal_volume_io.h>. Replace <images.h> and
<numerical.h> by <bicpl/...>.
* configure.in: Do not check for header <numerical.h>, nor for
<internal_volume_io.h>. Do not probe for C++ compiler.
2001-09-24 Jason Lerch <[email protected]>
* minc_to_rgb.c: Changed UNSIGNED_LONG to UNSIGNED_INT
2001-09-06 Jason Lerch <[email protected]>
* surface_mask2: Changed the logic so that an explicity binary
volume is created which is used to mask the original volume. Also
forced the inclusion of the object boundaries in the mask.
2001-06-04 Peter Neelin <[email protected]>
* print_all_label_bounding_boxes: Fixed test for y_max that was
testing against the xw coordinate, rather than yw.
2001-05-11 Steve M. Robbins <[email protected]>
* Update: Add files in ~david/Source/Batch_processing that did not
have an associated RCS file. Add subdirectories Conglomerate and
Csh. The files "test.obj" and "tt.obj" were converted to ascii
format. Other obvious junk was removed, mostly files full of
curvature numbers, and the like. This is tagged with
David-2001-05-11.
* Update: Updated all the current files from the checked-out
versions in ~david/Source/Batch_processing. This is tagged with
David-RCS-update.
* RCS: The first import into CVS is a straight copy of
~david/Source/Batch_processing/RCS, plus this ChangeLog file.
This collection of files is tagged David-RCS.
* symlinks: The following symlinks were replaced by their target
files: test.obj, tt.obj.
* symlinks: The following symlinks were removed:
00100_81920.obj.gz, 00101, MNE.mnc,
phantom_1-0mm_normal_wht_20480.obj, 00100_20480.obj.gz.
* Batch_processing: Copied all of ~david/Source/Batch_processing
except "RCS/test_dynamic.c,v" and "sean", which were
read-protected. Both files are old, dating to February 1996. For
"test_dynamic.c", the checked-out file is newer, in any case.