Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Extract metadata from mesoscope rig acquisition files #24

Open
dyf opened this issue Feb 2, 2024 · 0 comments
Open

Extract metadata from mesoscope rig acquisition files #24

dyf opened this issue Feb 2, 2024 · 0 comments
Assignees

Comments

@dyf
Copy link
Member

dyf commented Feb 2, 2024

Write a script that generates session.json based on the files acquired on Mindscope rigs. Use aind_data_schema.ophys.ophys_rig to generate valid JSON.

https://github.com/AllenNeuralDynamics/aind-data-schema/blob/main/src/aind_data_schema/ophys/ophys_rig.py

This may require schema changes, which can be tracked in separate issues as needed.

Nov 8: Kayvon is looking into a related process for Bergamo.

Prior to capsule, script running on the rig. AIND data transfer service. Will need to be automated.
Should involve John and David.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants