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simulation exercise
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docs/simulation.rst

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@@ -50,7 +50,7 @@ Family-based GWAS without imputed parental genotypes
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To perform a family-based GWAS, we use the :ref:`gwas.py <gwas.py>` script.
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To perform a family-based GWAS without imputed parental genotypes, use the following command:
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``gwas.py phenotype.txt --pedigree pedigree.txt --bed chr_@ --out chr_@_sibdiff ``
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``gwas.py phenotype.txt --pedigree pedigree.txt --bed chr_@ --out chr_@_sibdiff``
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The first argument is the phenotype file. As we are not inputting an imputed parental genotype file,
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we must specify the pedigree information from the pedigree file using the ``--pedigree pedigree.txt`` argument.

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