n3dr doesnt upload a whole version if a *-jar-with-dependencies.jar is present as artifact

[kaerbr]

What happened:
I have two local nexus3 instances running using docker/podman:

• podman run --rm -it -p 8080:8081 --name nexus-old sonatype/nexus3:3.72.0
• podman run --rm -it -p 8081:8081 --name nexus-new sonatype/nexus3:3.72.0

I have created an simple maven demo project: demo.zip
As distributionManagement in my pom I've added the following:

<distributionManagement>
    <repository>
        <id>releases</id>
        <url>http://localhost:8080/repository/maven-releases/</url>
    </repository>
    <snapshotRepository>
        <id>snapshots</id>
        <url>http://localhost:8080/repository/maven-snapshots/</url>
    </snapshotRepository>
</distributionManagement>

I have run a mvn clean deploy with 1.0.0 as Version.
For Version 2.0.0 I've added the maven-assembly-plugin to add a artifact which contains all dependencies.

<build>
  <plugins>
    <plugin>
      <groupId>org.apache.maven.plugins</groupId>
      <artifactId>maven-assembly-plugin</artifactId>
      <version>3.7.1</version>
      <executions>
        <execution>
          <phase>package</phase>
          <goals>
            <goal>single</goal>
          </goals>
        </execution>
      </executions>
      <configuration>
        <archive>
          <manifest>
            <addClasspath>true</addClasspath>
            <addDefaultImplementationEntries>true</addDefaultImplementationEntries>
            <mainClass/>
          </manifest>
        </archive>
        <descriptorRefs>
          <descriptorRef>jar-with-dependencies</descriptorRef>
        </descriptorRefs>
      </configuration>
    </plugin>
  </plugins>
</build>

This (correctly) resulted in:

The next step was to backup the nexus-old instance using: n3dr repositoriesV2 --backup --directory-prefix ./backup -n localhost:8080 -u admin -p admin --https=false which (correctly) resulted in:

The next step was to restore/upload the backupped files/artifatcs to the nexus-new instance using: n3dr repositoriesV2 --upload --directory-prefix ./backup -n localhost:8081 -u admin -p admin --https=false. The command ran without any errors:

Log with --logLevel debug

INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:84 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).reposOnDisk() found the following localDiskRepos: '[maven-central maven-releases maven-snapshots nuget-hosted nuget.org-proxy]'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:717 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() Uploading files to Nexus: 'localhost:8081' repository: 'maven-snapshots'...
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:717 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() Uploading files to Nexus: 'localhost:8081' repository: 'nuget-hosted'...
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:717 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() Uploading files to Nexus: 'localhost:8081' repository: 'nuget.org-proxy'...
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:717 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() Uploading files to Nexus: 'localhost:8081' repository: 'maven-releases'...
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:717 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() Uploading files to Nexus: 'localhost:8081' repository: 'maven-central'...
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:113 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).repoFormatLocalDiskRepo() format of repo: 'nuget-hosted' is: 'nuget' and repoType: 'hosted'
WARN[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:737 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() only uploads to 'hosted' repositories are supported. Current: '{nuget hosted}'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:113 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).repoFormatLocalDiskRepo() format of repo: 'maven-releases' is: 'maven2' and repoType: 'hosted'
WARN[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:737 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() only uploads to 'hosted' repositories are supported. Current: '{maven2 hosted}'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:740 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() upload to snapshot repo
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:113 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).repoFormatLocalDiskRepo() format of repo: 'maven-central' is: 'maven2' and repoType: 'proxy'

WARN[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:737 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() only uploads to 'hosted' repositories are supported. Current: '{maven2 proxy}'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:113 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).repoFormatLocalDiskRepo() format of repo: 'nuget.org-proxy' is: 'nuget' and repoType: 'proxy'
WARN[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:737 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() only uploads to 'hosted' repositories are supported. Current: '{nuget proxy}'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:113 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).repoFormatLocalDiskRepo() format of repo: 'maven-snapshots' is: 'maven2' and repoType: 'hosted'
WARN[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:737 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() only uploads to 'hosted' repositories are supported. Current: '{maven2 hosted}'
INFO[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:740 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadArtifactsSingleDir() upload to snapshot repo
DEBU[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:314 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of file: 'backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.jar' is '89ee6db729e6254fb06264ae6f1bfab3a7ae3bf66a8e5811d7aa21cdac3a294f2607fcfdbf461dc97e861bf1970b3e66b275f77463240d7bf7f55a7b71e5e3aa'
DEBU[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:330 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksumOfArtifactInNexus3Sha512URL: 'http://localhost:8081/repository/maven-releases/com/example/demo/1.0.0/demo-1.0.0.jar.sha512'
DEBU[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:352 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of artifact in nexus3: '

<title>404 - Sonatype Nexus Repository</title>

Sonatype Nexus Repository

OSS 3.72.0-04

Error 404 Not Found

com/example/demo/1.0.0/demo-1.0.0.jar.sha512

'
DEBU[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:394 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() folder: 'backup/maven-releases/com/example/demo/1.0.0' contains a pom file: 'backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.pom'
DEBU[0000]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:449 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() Maven2 asset upload 1=backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.pom 2=empty 3=backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.jar 4=empty 5=empty
6=empty 7=empty
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:595 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.upload() artifact: 'backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.jar' has been uploaded
+DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:314 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of file: 'backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.pom' is '6ab300e301350160bb3858ae13abb240e88ab3752aa122a35b7fc048c19e4385145bb5e6f6eb12faaefbe907a443ae703c80c89e6d3b00815d6b0957f77bbe07'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:330 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksumOfArtifactInNexus3Sha512URL: 'http://localhost:8081/repository/maven-releases/com/example/demo/1.0.0/demo-1.0.0.pom.sha512'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:352 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of artifact in nexus3: '6ab300e301350160bb3858ae13abb240e88ab3752aa122a35b7fc048c19e4385145bb5e6f6eb12faaefbe907a443ae703c80c89e6d3b00815d6b0957f77bbe07'
INFO[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:356 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() the checksum of the filesystem: '6ab300e301350160bb3858ae13abb240e88ab3752aa122a35b7fc048c19e4385145bb5e6f6eb12faaefbe907a443ae703c80c89e6d3b00815d6b0957f77bbe07' is identical to the one in Nexus3: '6ab300e301350160bb3858ae13abb240e88ab3752aa122a35b7fc048c19e4385145bb5e6f6eb12faaefbe907a443ae703c80c89e6d3b00815d6b0957f77bbe07'. Outcome: 'true'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:370 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() artifact: 'demo-1.0.0.pom' has already been uploaded
+DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:633 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadAndPrintRepoFormat() checksum file: 'backup/maven-releases/com/example/demo/1.0.0/demo-1.0.0.pom' locally is identical compared to one in nexus
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:314 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of file: 'backup/maven-releases/com/example/demo/2.0.0/demo-2.0.0-jar-with-dependencies.jar' is 'a182aa4fc1f9980678727ecc7ee8e8d0b88f4701ae8114ae2c147c4fd9471dcf2dbe82aa688d8697e22ff0849325b19d34febaf565a13132fa384fc6cd19e876'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:330 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksumOfArtifactInNexus3Sha512URL: 'http://localhost:8081/repository/maven-releases/com/example/demo/2.0.0/demo-2.0.0-jar-with-dependencies.jar.sha512'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:352 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of artifact in nexus3: '

<title>404 - Sonatype Nexus Repository</title>

Sonatype Nexus Repository

OSS 3.72.0-04

Error 404 Not Found

com/example/demo/2.0.0/demo-2.0.0-jar-with-dependencies.jar.sha512

'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:451 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() folder: 'backup/maven-releases/com/example/demo/2.0.0' does not contain a pom file: 'backup/maven-releases/com/example/demo/2.0.0/demo-2.0.0-jar-with.pom'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:479 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() the following groupID has been found: 'com/example/demo/2.0.0'
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:521 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).UploadSingleArtifact() Maven2 asset upload 1=empty 2=empty 3=empty
4=empty 5=empty 6=empty 7=empty
DEBU[0001]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:619 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).uploadAndPrintRepoFormat() artifact: 'backup/maven-releases/com/example/demo/2.0.0/demo-2.0.0-jar-with-dependencies.jar' has already been uploaded
DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:314 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of file: 'backup/maven-releases/com/example/demo/2.0.0/demo-2.0.0.jar' is 'e5ab57d81c475c6f79f207133f1c59c264e2791ccd532d26c50096fb77b93ef714c3c79553c0fa17f79ac194f00d176ec6c99784d18703fca5f2f82dab62c06b'
DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:330 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksumOfArtifactInNexus3Sha512URL: 'http://localhost:8081/repository/maven-releases/com/example/demo/2.0.0/demo-2.0.0.jar.sha512'
DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:352 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of artifact in nexus3: '

<title>404 - Sonatype Nexus Repository</title>

Sonatype Nexus Repository

OSS 3.72.0-04

Error 404 Not Found

com/example/demo/2.0.0/demo-2.0.0.jar.sha512

'
+DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:314 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of file: 'backup/maven-releases/com/example/demo/2.0.0/demo-2.0.0.pom' is 'fceeba6ac1209eba04ae20197dffabe318cc70e62ce98aa266423a1f4eae9fc91429c55cb7285ef6e7adf4432c86e81027c5422a7a7bb3136be3c7590a13498b'
DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:330 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksumOfArtifactInNexus3Sha512URL: 'http://localhost:8081/repository/maven-releases/com/example/demo/2.0.0/demo-2.0.0.pom.sha512'
DEBU[0002]/home/runner/work/n3dr/n3dr/internal/app/n3dr/artifactsv2/upload/upload.go:352 github.com/030/n3dr/internal/app/n3dr/artifactsv2/upload.(*Nexus3).checkLocalChecksumAndCompareWithOneInRemote() checksum of artifact in nexus3: '

<title>404 - Sonatype Nexus Repository</title>

Sonatype Nexus Repository

OSS 3.72.0-04

Error 404 Not Found

com/example/demo/2.0.0/demo-2.0.0.pom.sha512

'
+DEBU[0002]/home/runner/work/n3dr/n3dr/cmd/n3dr/root.go:64 main.execute.func1() n3dr was running for: '1.971639703s'

Unfortunately the demo-2.0.0-jar-with-dependencies.jar is not being uploaded to nexus-new. Even more the whole version 2.0.0 has not been uploaded to nexus-new:

What you expected to happen:
I would expect n3dr to upload both versions with all artifacts.

Environment:

• nexus version: 3.72.0

• n3dr version (use n3dr -v): n3dr version refs/tags/7.5.2

• OS (e.g: cat /etc/os-release): Ubuntu 24.04 LTS

• Kernel (e.g. uname -a): Linux Zephyrus 5.15.153.1-microsoft-standard-WSL2

• Others: